Factsheet for VIT_18s0001g09360.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078110.1.1	Tomato	extracellular	70.59	70.5
VIT_07s0129g00490.t01	Wine grape	extracellular	70.59	70.4
PGSC0003DMT400055410	Potato	extracellular	70.46	70.37
KRH52072	Soybean	nucleus	70.33	69.96
KRH61386	Soybean	nucleus	69.8	69.35
KRH15432	Soybean	nucleus	68.89	68.09
KRH05609	Soybean	extracellular, vacuole	68.63	67.57
GSMUA_Achr9P09530_001	Banana	extracellular, vacuole	64.44	65.13
GSMUA_Achr6P11180_001	Banana	plastid	41.57	64.77
GSMUA_Achr6P34760_001	Banana	extracellular	51.37	64.43
Os03t0605300-01	Rice	extracellular	63.92	63.92
Zm00001d033194_P001	Maize	extracellular	63.4	63.48
KXG38048	Sorghum	extracellular	64.05	63.31
TraesCS4B01G077600.1	Wheat	extracellular	63.27	63.1
HORVU4Hr1G013170.1	Barley	extracellular	63.53	62.95
TraesCS4A01G237500.1	Wheat	unclear	62.88	62.71
TraesCS4D01G076000.1	Wheat	extracellular	62.61	62.7
Os03t0761500-01	Rice	extracellular, vacuole	61.57	61.65
EER90842	Sorghum	extracellular, plasma membrane	61.05	61.13
Zm00001d034112_P001	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	60.52	60.52
TraesCS5D01G409600.1	Wheat	unclear	59.74	59.82
HORVU5Hr1G097150.1	Barley	extracellular, vacuole	59.61	59.69
TraesCS5A01G399800.1	Wheat	golgi	59.35	59.35
TraesCS5B01G404600.1	Wheat	golgi	59.22	59.29
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	53.07	53.35
VIT_09s0002g01040.t01	Wine grape	extracellular	53.07	52.66
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	52.94	52.33
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	53.59	52.03
VIT_03s0038g02230.t01	Wine grape	extracellular	51.5	50.9
VIT_15s0048g01120.t01	Wine grape	cytosol	47.58	48.15
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	35.56	47.39
VIT_07s0005g00830.t01	Wine grape	extracellular, plasma membrane	44.84	46.35
VIT_15s0048g01180.t01	Wine grape	extracellular	44.97	44.85
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	44.84	44.78
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	47.97	44.27
VIT_10s0003g02220.t01	Wine grape	nucleus	43.92	43.47
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	43.4	43.23
VIT_00s0454g00010.t01	Wine grape	extracellular	37.78	41.46
VIT_00s0454g00040.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.09	38.38
VIT_15s0048g01170.t01	Wine grape	cytosol	45.88	23.83
VIT_00s0454g00030.t01	Wine grape	extracellular, plasma membrane	42.88	17.61

Protein Annotations

EntrezGene:100257444	wikigene:100257444	MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	EMBL:AM430442	ProteinID:CAN62640	ProteinID:CAN62640.1	ProteinID:CCB45769	ProteinID:CCB45769.1
UniProt:F6GZN7	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045
EntrezGene:LOC100257444	wikigene:LOC100257444	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922
PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF388	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.112	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	TIGR:TC57933	UniParc:UPI000210A05A	ArrayExpress:VIT_18s0001g09360
EnsemblPlantsGene:VIT_18s0001g09360	EnsemblPlants:VIT_18s0001g09360.t01	unigene:Vvi.230	RefSeq:XP_002283279	RefSeq:XP_002283279.2	SEG:seg

Description

No Description!

Coordinates

chr18:+:7848980..7853050

Molecular Weight (calculated)

80880.8 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.049

Length

765 amino acids

Sequence
(BLAST)

001: MKTWRLSIVV LVSFHFALVV AEEIKHQQKN TYIVHMDKSN MPTTFDDHFQ WYDSSLKTAS SSADMLYTYN NVVHGFSTRL TTEEAELLRG QLGILSVLPE
101: ARYELHTTRT PEFLGLGKSV AFLPQADSAS EVIVGVLDTG VWPELKSFDD TGLGPVPSSW KGECETGKTF PLSSCNRKLI GARFFSRGYE VAFGPVNETI
201: ESRSPRDDDG HGSHTSTTAV GSAVEGASLF GFAAGTARGM ATHARVAAYK VCWLGGCYGS DIVAAMDKAV QDGVDVLSMS IGGGLSDYTK DSVAIGAFRA
301: MEQGILVSCS AGNGGPAPSS LSNVAPWITT VGAGTLDRDF PAFVMLGDGK KFSGVSLYSG KPLSDSLIPL VYAGNASSSP NGNLCIPDNL IPGKVAGKIV
401: LCDRGSNARV QKGIVVKEAG GVGMILTNTD LYGEELVADA HLLPTAAVGQ KAGDSIKSYI SSDPNPMATI APGGTQVGVQ PSPVVASFSS RGPNPVTPEI
501: LKPDIIAPGV NILAGWTGAV GPTGLQVDTR KVSFNIISGT SMSCPHVSGL AALLKAAHPE WRPAAIKSAL MTTAYHTYKG GETIQDVATG RPATPFDYGA
601: GHVNPVSALD PGLVYDATVD DYLSFFCALN YKQDEIKRFT NRDFTCDMNK KYSVEDLNYP SFAVPLQTAS GKGGGSGELT VVKYTRTLTN VGTPATYKVS
701: VSSQISSVKI SVEPESLTFS EPNEKKSYTV TFTASSMPSG MTSFAHLEWS DGKHIVGSPV AFSWT

Best Arabidopsis Sequence Match ( AT5G67360.1 )
(BLAST)

001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT

Arabidopsis Description

SBT1.7Subtilisin-like protease SBT1.7 [Source:UniProtKB/Swiss-Prot;Acc:O65351]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.