CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52072	Soybean	nucleus	95.06	95.19
KRH15432	Soybean	nucleus	75.45	75.06
KRH05609	Soybean	extracellular, vacuole	74.94	74.26
VIT_18s0001g09360.t01	Wine grape	extracellular	69.35	69.8
PGSC0003DMT400055410	Potato	extracellular	67.27	67.62
Solyc04g078110.1.1	Tomato	extracellular	67.27	67.62
GSMUA_Achr6P11180_001	Banana	plastid	41.17	64.56
GSMUA_Achr6P34760_001	Banana	extracellular	51.04	64.43
KRH58046	Soybean	extracellular, vacuole	62.86	64.11
KRH04480	Soybean	endoplasmic reticulum	62.73	63.55
GSMUA_Achr9P09530_001	Banana	extracellular, vacuole	61.82	62.88
Zm00001d033194_P001	Maize	extracellular	61.69	62.17
Os03t0605300-01	Rice	extracellular	61.69	62.09
KXG38048	Sorghum	extracellular	61.43	61.11
TraesCS4B01G077600.1	Wheat	extracellular	60.65	60.89
TraesCS4D01G076000.1	Wheat	extracellular	60.26	60.73
TraesCS4A01G237500.1	Wheat	unclear	60.39	60.63
HORVU4Hr1G013170.1	Barley	extracellular	60.0	59.84
EER90842	Sorghum	extracellular, plasma membrane	58.83	59.29
Os03t0761500-01	Rice	extracellular, vacuole	58.83	59.29
Zm00001d034112_P001	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	58.44	58.82
HORVU5Hr1G097150.1	Barley	extracellular, vacuole	57.53	57.98
TraesCS5B01G404600.1	Wheat	golgi	57.27	57.72
TraesCS5D01G409600.1	Wheat	unclear	57.01	57.46
TraesCS5A01G399800.1	Wheat	golgi	57.01	57.39
KRH28401	Soybean	extracellular	56.75	56.75
KRH76515	Soybean	extracellular	56.1	55.74
KRH19326	Soybean	extracellular, vacuole	50.52	51.8
KRH02601	Soybean	cytosol, nucleus	47.53	51.69
KRH38672	Soybean	nucleus	51.95	51.55
KRH09188	Soybean	nucleus	52.21	51.47
KRH37498	Soybean	nucleus	50.52	50.52
KRG91405	Soybean	nucleus	50.52	49.81
KRH35414	Soybean	nucleus	50.52	49.74
KRH47618	Soybean	extracellular	49.48	49.16
KRH24297	Soybean	nucleus	48.83	48.64
KRH62506	Soybean	extracellular	41.04	48.02
KRH47696	Soybean	extracellular, nucleus	48.44	47.7
KRH06267	Soybean	plasma membrane	48.05	47.68
KRH12543	Soybean	extracellular, golgi	28.83	47.64
KRH60704	Soybean	extracellular, plasma membrane	47.92	47.49
KRH01628	Soybean	nucleus	44.55	47.44
KRH70486	Soybean	nucleus	46.75	46.63
KRG97289	Soybean	extracellular, plasma membrane	46.36	46.48
KRH69016	Soybean	extracellular, plasma membrane	45.71	45.71
KRH01924	Soybean	cytosol, nucleus	20.91	42.48
KRH58852	Soybean	nucleus	42.21	42.04
KRH01047	Soybean	cytosol	32.21	41.61
KRH03962	Soybean	extracellular, vacuole	41.43	41.32
KRH42754	Soybean	extracellular, vacuole	41.17	41.01
KRH51225	Soybean	extracellular, plasma membrane	40.78	40.62
KRH21143	Soybean	nucleus	41.56	40.56
KRH40182	Soybean	extracellular, vacuole	40.52	39.64
KRH14769	Soybean	extracellular	40.0	39.14
KRH14771	Soybean	nucleus	39.61	38.95
KRH14773	Soybean	endoplasmic reticulum, extracellular, vacuole	39.48	38.83
KRH11105	Soybean	cytosol	17.66	38.42
KRH01039	Soybean	nucleus	39.35	37.64
KRH06199	Soybean	endoplasmic reticulum, nucleus	49.61	26.77
KRH01042	Soybean	endoplasmic reticulum	1.56	15.19

Protein Annotations

EntrezGene:100794284	MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
UniProt:A0A0R4J339	EMBL:ACUP02002162	EnsemblPlantsGene:GLYMA_04G044600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852
InterPro:IPR037045	EnsemblPlants:KRH61386	ProteinID:KRH61386	ProteinID:KRH61386.1	InterPro:PA_domain	PFAM:PF00082
PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF388
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	UniParc:UPI000189D7D8	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:3556928..3559705

Molecular Weight (calculated)

82390.8 Da

IEP (calculated)

8.753

GRAVY (calculated)

-0.146

Length

770 amino acids

Sequence
(BLAST)

001: MVDKMNMLIF KSLQISLLLV FSIRNTTAEK KTHHTKHTYI IHMDKFNMPE SFNDHLLWFD SSLKSVSDSA EMLYTYKKVA HGFSTRLTTQ EAELLSKQPG
101: VLSVIPEVRY DLHTTRTPEF LGLAKYSTLS LASGKQSDVI VGVLDTGVWP ELKSFDDTGL GPVPSSWKGE CERGKNFNPS NCNKKLVGAR FFSRGYEAAF
201: GPIDEKTESK SPRDDDGHGS HTSTTAAGSA VVGASLFGFA NGTARGMATQ ARLATYKVCW LGGCFTSDIA AGIDKAIEDG VNILSMSIGG GLMDYYKDTI
301: AIGTFAATAH GILVSNSAGN GGPSQATLSN VAPWLTTVGA GTIDRDFPAY ITLGNGKMYT GVSLYNGKLP PNSPLPIVYA ANVSDESQNL CTRGTLIAEK
401: VAGKIVICDR GGNARVEKGL VVKSAGGIGM ILSNNEDYGE ELVADSYLLP AAALGQKSSN ELKKYVFSSP NPTAKLGFGG TQLGVQPSPV VAAFSSRGPN
501: VLTPKILKPD LIAPGVNILA GWTGAVGPTG LTEDTRHVEF NIISGTSMSC PHVTGLAALL KGTHPEWSPA AIRSALMTTA YRTYKNGQTI KDVATGLPAT
601: PFDYGAGHVD PVAAFDPGLV YDTSVDDYLS FFCALNYSSY QIKLVARRDF TCSKRNNYRV EDLNYPSFAV PFNTAYGVKG GSRKPATVQY TRTLTNVGAP
701: ATYKVSVSQS PSVKIMVQPQ TLSFGGLNEK KNYTVTFTSS SKPSGTNSFA YLEWSDGKHK VTSPIAFSWT

Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)

001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF

Arabidopsis Description

SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.