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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
 nucleus: 21132161
endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH58046 Soybean extracellular, vacuole 93.42 94.04
VIT_07s0129g00490.t01 Wine grape extracellular 75.0 74.32
PGSC0003DMT400038500 Potato cytosol 70.92 73.94
PGSC0003DMT400064275 Potato cytosol 40.26 72.17
Solyc03g044150.2.1 Tomato extracellular 72.11 71.08
PGSC0003DMT400064274 Potato extracellular 69.08 69.72
Solyc02g092670.1.1 Tomato extracellular 68.95 69.5
Solyc02g092680.1.1 Tomato extracellular 65.53 66.14
GSMUA_Achr6P34760_001 Banana extracellular 52.76 65.74
KRH28401 Soybean extracellular 66.45 65.58
GSMUA_Achr9P09530_001 Banana extracellular, vacuole 64.47 64.73
GSMUA_Achr6P11180_001 Banana plastid 41.58 64.36
HORVU5Hr1G097150.1 Barley extracellular, vacuole 63.82 63.48
KRH52072 Soybean nucleus 63.68 62.94
TraesCS5A01G399800.1 Wheat golgi 63.29 62.88
TraesCS5B01G404600.1 Wheat golgi 63.16 62.83
TraesCS5D01G409600.1 Wheat unclear 63.16 62.83
Os03t0605300-01 Rice extracellular 63.16 62.75
KRH61386 Soybean nucleus 63.55 62.73
KRH15432 Soybean nucleus 63.68 62.53
TraesCS4A01G237500.1 Wheat unclear 62.89 62.32
TraesCS4B01G077600.1 Wheat extracellular 62.76 62.19
EER90842 Sorghum extracellular, plasma membrane 62.5 62.17
KRH76515 Soybean extracellular 63.29 62.06
Zm00001d033194_P001 Maize extracellular 62.24 61.91
Os03t0761500-01 Rice extracellular, vacuole 62.24 61.91
TraesCS4D01G076000.1 Wheat extracellular 62.11 61.78
HORVU4Hr1G013170.1 Barley extracellular 62.63 61.66
KRH05609 Soybean extracellular, vacuole 62.5 61.13
KXG38048 Sorghum extracellular 62.11 60.98
Zm00001d034112_P001 Maize endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 61.32 60.91
KRH09188 Soybean nucleus 54.87 53.39
KRH38672 Soybean nucleus 54.47 53.35
KRH37498 Soybean nucleus 53.82 53.12
KRH19326 Soybean extracellular, vacuole 51.71 52.33
KRH35414 Soybean nucleus 53.68 52.17
KRH47618 Soybean extracellular 53.16 52.13
KRG91405 Soybean nucleus 53.55 52.11
KRH02601 Soybean cytosol, nucleus 47.76 51.27
KRH62506 Soybean extracellular 44.34 51.22
KRH24297 Soybean nucleus 50.26 49.42
KRH12543 Soybean extracellular, golgi 30.13 49.14
KRH06267 Soybean plasma membrane 49.34 48.32
KRH47696 Soybean extracellular, nucleus 49.47 48.08
KRH60704 Soybean extracellular, plasma membrane 49.08 48.01
KRG97289 Soybean extracellular, plasma membrane 47.5 47.01
KRH01628 Soybean nucleus 44.21 46.47
KRH69016 Soybean extracellular, plasma membrane 46.84 46.23
KRH70486 Soybean nucleus 46.71 45.98
KRH01924 Soybean cytosol, nucleus 22.76 45.65
KRH58852 Soybean nucleus 45.66 44.89
KRH51225 Soybean extracellular, plasma membrane 45.66 44.89
KRH01047 Soybean cytosol 35.13 44.8
KRH42754 Soybean extracellular, vacuole 44.61 43.86
KRH40182 Soybean extracellular, vacuole 43.82 42.31
KRH01039 Soybean nucleus 43.29 40.87
KRH03962 Soybean extracellular, vacuole 41.18 40.54
KRH21143 Soybean nucleus 41.05 39.54
KRH14769 Soybean extracellular 40.92 39.52
KRH14771 Soybean nucleus 40.39 39.21
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 39.34 38.19
KRH11105 Soybean cytosol 16.84 36.16
KRH06199 Soybean endoplasmic reticulum, nucleus 53.03 28.24
KRH01042 Soybean endoplasmic reticulum 1.84 17.72
Protein Annotations
EntrezGene:100776647MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30
UniProt:A0A0R4J5Q8EMBL:ACUP02010420EnsemblPlantsGene:GLYMA_17G164100GO:GO:0003674GO:GO:0003824GO:GO:0004252
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538InterPro:IPR036852
InterPro:IPR037045EnsemblPlants:KRH04480ProteinID:KRH04480ProteinID:KRH04480.1InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF469
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52025SUPFAM:SSF52743SignalP:SignalP-noTMUniParc:UPI000189D440SEG:seg
Description
hypothetical protein
Coordinates
chr17:+:14689702..14692966
Molecular Weight (calculated)
79969.6 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.019
Length
760 amino acids
Sequence
(BLAST)
001: MGPFRKPFLA FLSVVLFLGL YEAAAEQTQT HKSTYIVHVA KSEMPESFEH HAVWYESSLK TVSDSAEMIY TYDNAIHGYA TRLTAEEARL LQRQTGILAV
101: LPETRYELFT TRTPLFLGLD KSADLFPESS SGSDVIVGVL DTGVWPESKS FDDTGLGPVP STWKGACETG TNFTASNCNR KLIGARFFAK GVEAMLGPIN
201: ETEESRSARD DDGHGTHTSS TAAGSVVSGA SLLGYASGTA RGMATRARVA AYKVCWKGGC FSSDILAAIE RAILDNVNVL SLSLGGGISD YYRDSVAIGA
301: FSAMEKGILV SCSAGNSGPG PYSLSNVAPW ITTVGAGTLD RDFPAYVALG NGLNFSGVSL YRGNALPDSS LPLVYAGNVS NGAMNGNLCI TGTLSPEKVA
401: GKIVLCDRGL TARVQKGSVV KSAGALGMVL SNTAANGEEL VADAHLLPAT AVGQKAGDAI KKYLVSDAKP TVKIFFEGTK VGIQPSPVVA AFSSRGPNSI
501: TPQILKPDLI APGVNILAGW SKAVGPTGLP VDNRRVDFNI ISGTSMSCPH VSGLAALIKS AHPDWSPAAV RSALMTTAYT VYKTGEKLQD SATGKPSTPF
601: DHGSGHVDPV AALNPGLVYD LTVDDYLGFL CALNYSAAEI STLAKRKFQC DAGKQYSVTD LNYPSFAVLF ESSGSVVKHT RTLTNVGPAG TYKASVTSDT
701: ASVKISVEPQ VLSFKENEKK TFTVTFSSSG SPQHTENAFG RVEWSDGKHL VGSPISVNWG
Best Arabidopsis Sequence Match ( AT5G67360.1 )
(BLAST)
001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT
Arabidopsis Description
SBT1.7Subtilisin-like protease SBT1.7 [Source:UniProtKB/Swiss-Prot;Acc:O65351]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.