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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 nucleus: 21132161
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH60704 Soybean extracellular, plasma membrane 80.6 80.18
VIT_03s0038g02230.t01 Wine grape extracellular 79.69 79.59
PGSC0003DMT400015864 Potato extracellular 76.07 76.17
Solyc01g111400.2.1 Tomato nucleus 75.94 76.04
CDX72509 Canola extracellular, plasma membrane 74.0 75.56
CDY40653 Canola extracellular, vacuole 74.51 75.1
Bra017684.1-P Field mustard extracellular, plasma membrane 74.39 74.97
AT4G34980.1 Thale cress extracellular, plasma membrane 73.35 74.21
GSMUA_Achr2P11210_001 Banana extracellular, plasma membrane, vacuole 61.97 68.43
Os03t0242900-01 Rice extracellular, plasma membrane 64.3 63.72
TraesCS4B01G227400.1 Wheat extracellular, plasma membrane 63.78 63.04
TraesCS4A01G071500.1 Wheat extracellular, plasma membrane 63.26 62.53
TraesCS4D01G228200.1 Wheat extracellular, plasma membrane 63.39 62.42
EER92571 Sorghum extracellular, plasma membrane 62.74 61.39
Zm00001d028391_P001 Maize extracellular 62.74 61.08
KRH06267 Soybean plasma membrane 57.31 57.09
KRH47696 Soybean extracellular, nucleus 57.44 56.78
HORVU4Hr1G063870.1 Barley plastid 63.52 55.29
KRG97289 Soybean extracellular, plasma membrane 54.72 55.08
KRH69016 Soybean extracellular, plasma membrane 54.85 55.06
KRH58046 Soybean extracellular, vacuole 49.81 50.99
KRH04480 Soybean endoplasmic reticulum 49.42 50.26
KRH02601 Soybean cytosol, nucleus 45.41 49.58
KRH37498 Soybean nucleus 49.29 49.48
KRG91405 Soybean nucleus 49.81 49.3
KRH47618 Soybean extracellular 49.42 49.29
KRH52072 Soybean nucleus 49.03 49.28
KRH35414 Soybean nucleus 49.68 49.1
KRH28401 Soybean extracellular 48.9 49.09
KRH61386 Soybean nucleus 48.64 48.83
KRH09188 Soybean nucleus 48.9 48.4
KRH19326 Soybean extracellular, vacuole 46.96 48.34
KRH38672 Soybean nucleus 48.38 48.2
KRH15432 Soybean nucleus 47.99 47.93
KRH05609 Soybean extracellular, vacuole 47.99 47.75
KRH62506 Soybean extracellular 39.72 46.66
KRH12543 Soybean extracellular, golgi 27.94 46.35
KRH01628 Soybean nucleus 42.95 45.92
KRH76515 Soybean extracellular 45.67 45.55
KRH70486 Soybean nucleus 45.28 45.34
KRH58852 Soybean nucleus 43.98 43.98
KRH01924 Soybean cytosol, nucleus 21.47 43.8
KRH42754 Soybean extracellular, vacuole 43.6 43.6
KRH03962 Soybean extracellular, vacuole 43.08 43.13
KRH51225 Soybean extracellular, plasma membrane 41.4 41.4
KRH01047 Soybean cytosol 31.57 40.94
KRH14769 Soybean extracellular 41.27 40.53
KRH14771 Soybean nucleus 40.88 40.36
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 40.75 40.23
KRH11105 Soybean cytosol 17.98 39.27
KRH21143 Soybean nucleus 39.84 39.04
KRH40182 Soybean extracellular, vacuole 39.59 38.88
KRH01039 Soybean nucleus 38.29 36.77
KRH06199 Soybean endoplasmic reticulum, nucleus 49.94 27.05
KRH01042 Soybean endoplasmic reticulum 0.91 8.86
Protein Annotations
EntrezGene:100817537MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30
EMBL:ACUP02007173EnsemblPlantsGene:GLYMA_12G031800GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538UniProt:I1LPR5InterPro:IPR036852
InterPro:IPR037045EnsemblPlants:KRH24297ProteinID:KRH24297ProteinID:KRH24297.1InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PFscan:PS51257PANTHER:PTHR10795
PANTHER:PTHR10795:SF442InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3
MEROPS:S08.A39InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52025SUPFAM:SSF52743SignalP:SignalP-noTM
UniParc:UPI000233C8D1SEG:seg::::
Description
hypothetical protein
Coordinates
chr12:+:2387513..2390579
Molecular Weight (calculated)
81906.8 Da
IEP (calculated)
9.444
GRAVY (calculated)
-0.008
Length
773 amino acids
Sequence
(BLAST)
001: MGKQVLNSFR PPVVFLLFFI VFSVVSCDEA SKTFIFRVDS QSKPTIFPTH YHWYTSEFAQ ETSILHVYDT VFHGFSAVLT HQQVASISQH PSVLAVFEDR
101: RRQLHTTRSP QFLGLRNQRG LWSESDYGSD VIIGVFDTGV WPERRSFSDL NLGPIPRRWK GACETGVRFS PKNCNRKLIG ARFFSKGHEA GAGSGPLNPI
201: NDTVEFRSPR DADGHGTHTA STAAGRYAFQ ASMSGYAAGI AKGVAPKARL AAYKVCWKNS GCFDSDILAA FDAAVNDGVD VISISIGGGD GIASPYYLDP
301: IAIGSYGAVS RGVFVSSSAG NDGPSGMSVT NLAPWLTTVG AGTIDRDFPS QVILGDGRRL SGVSLYAGAA LKGKMYQLVY PGKSGILGDS LCMENSLDPN
401: MVKGKIVICD RGSSPRVAKG LVVKKAGGVG MILANGISNG EGLVGDAHLL PACAVGANEG DVIKKYISSS TNPTATLDFK GTILGIKPAP VIASFSARGP
501: NGLNPQILKP DFIAPGVNIL AAWTQAVGPT GLDSDTRRTE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AALRSAMMTT ATVLDNRNQI MTDEATGNSS
601: TPYDFGAGHL NLGRAMDPGL VYDITNNDYV NFLCGIGYGP KVIQVITRAP ASCPVRRPAP ENLNYPSFVA MFPASSKGVA SKTFIRTVTN VGPANSVYRV
701: SVEAPASGVS VTVKPSRLVF SEAVKKRSYV VTVAGDTRKL KMGPSGAVFG SLTWTDGKHV VRSPIVVTQI EPL
Best Arabidopsis Sequence Match ( AT4G34980.1 )
(BLAST)
001: MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT
101: TRSPQFLGLQ NQKGLWSESD YGSDVIIGVF DTGIWPERRS FSDLNLGPIP KRWRGVCESG ARFSPRNCNR KIIGARFFAK GQQAAVIGGI NKTVEFLSPR
201: DADGHGTHTS STAAGRHAFK ASMSGYASGV AKGVAPKARI AAYKVCWKDS GCLDSDILAA FDAAVRDGVD VISISIGGGD GITSPYYLDP IAIGSYGAAS
301: KGIFVSSSAG NEGPNGMSVT NLAPWVTTVG ASTIDRNFPA DAILGDGHRL RGVSLYAGVP LNGRMFPVVY PGKSGMSSAS LCMENTLDPK QVRGKIVICD
401: RGSSPRVAKG LVVKKAGGVG MILANGASNG EGLVGDAHLI PACAVGSNEG DRIKAYASSH PNPIASIDFR GTIVGIKPAP VIASFSGRGP NGLSPEILKP
501: DLIAPGVNIL AAWTDAVGPT GLPSDPRKTE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AVIRSAMMTT TNLVDNSNRS LIDESTGKSA TPYDYGSGHL
601: NLGRAMNPGL VYDITNDDYI TFLCSIGYGP KTIQVITRTP VRCPTTRKPS PGNLNYPSIT AVFPTNRRGL VSKTVIRTAT NVGQAEAVYR ARIESPRGVT
701: VTVKPPRLVF TSAVKRRSYA VTVTVNTRNV VLGETGAVFG SVTWFDGGKH VVRSPIVVTQ MDTL
Arabidopsis Description
SBT1.6Subtilisin-like protease SBT1.6 [Source:UniProtKB/Swiss-Prot;Acc:O49607]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.