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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028391_P001 Maize extracellular 94.18 93.7
TraesCS4B01G227400.1 Wheat extracellular, plasma membrane 84.43 85.29
TraesCS4D01G228200.1 Wheat extracellular, plasma membrane 84.3 84.84
TraesCS4A01G071500.1 Wheat extracellular, plasma membrane 83.8 84.65
Os03t0242900-01 Rice extracellular, plasma membrane 83.42 84.49
HORVU4Hr1G063870.1 Barley plastid 83.16 73.99
GSMUA_Achr2P11210_001 Banana extracellular, plasma membrane, vacuole 61.14 69.0
VIT_03s0038g02230.t01 Wine grape extracellular 63.04 64.34
PGSC0003DMT400015864 Potato extracellular 62.41 63.86
Solyc01g111400.2.1 Tomato nucleus 62.15 63.6
Bra017684.1-P Field mustard extracellular, plasma membrane 61.65 63.49
CDX72509 Canola extracellular, plasma membrane 60.76 63.41
CDY40653 Canola extracellular, vacuole 61.52 63.36
AT4G34980.1 Thale cress extracellular, plasma membrane 61.01 63.09
KRH60704 Soybean extracellular, plasma membrane 61.9 62.93
KRH24297 Soybean nucleus 61.39 62.74
EES13951 Sorghum extracellular 51.77 50.81
EER90842 Sorghum extracellular, plasma membrane 48.99 50.65
KXG38048 Sorghum extracellular 49.49 50.52
EER94293 Sorghum extracellular 48.86 50.33
EER96794 Sorghum extracellular, plasma membrane 48.23 49.22
EES12694 Sorghum extracellular, golgi, plasma membrane 47.85 48.65
EES07654 Sorghum plastid 38.1 48.08
OQU93252 Sorghum extracellular 46.58 46.64
EES07632 Sorghum extracellular 46.33 46.51
EES05894 Sorghum extracellular 43.92 44.49
EER90461 Sorghum extracellular, golgi 42.91 42.75
KXG35865 Sorghum extracellular, mitochondrion 42.15 40.81
KXG33299 Sorghum plastid 42.03 40.15
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 39.75 39.25
KXG33202 Sorghum extracellular, plasma membrane, vacuole 39.37 38.54
OQU84580 Sorghum mitochondrion 41.52 36.85
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30EntrezGene:8054357
UniProt:C5WR08EnsemblPlants:EER92571ProteinID:EER92571ProteinID:EER92571.1GO:GO:0003674GO:GO:0003824
GO:GO:0004252GO:GO:0005575GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016787GO:GO:0019538InterPro:IPR036852InterPro:IPR037045InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF442
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3001G439800SUPFAM:SSF52743SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A82729
RefSeq:XP_002465573.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:71778857..71783751
Molecular Weight (calculated)
80939.1 Da
IEP (calculated)
8.515
GRAVY (calculated)
0.058
Length
790 amino acids
Sequence
(BLAST)
001: MATPRSPFLL LLGLALVALT APAVLRADGA GEEARKTYIF RVDHRAKPSV FPTHAHWYAS AAFASSAPGG AAPLQPLHVY GTVFHGFSAS VPASRAEELR
101: RHPAVLAAFE DRPRPLHTTR SPQFMGLRAR LGLWSVADYG SDVIVGVLDT GVWPERRSLS DRNLPPVPAR WRGGCDAGPG FPASSCNRKL VGARFFSQGH
201: GAHFGAEAVA SNGSVEFMSP RDADGHGTHT ATTAAGSVAY DASMEGYASG VAKGVAPKAR VAAYKVCWKG AGCMDSDILA GFDRAVADGV DVISVSIGGG
301: SGVTAPFYLD PIAIGSYGAV SRGVFVATSA GNEGPTSMSV TNLAPWLATV GAGTIDRNFP SEIVLGDGRR LSGVSLYSGK PLANSSLPLY YPGRTGGISA
401: SLCMENSIDP SLVKGKIIVC DRGSSPRVAK GMVVKEAGGA AMVLTNGDAN GEGLVGDAHV LPACALGEKE GDAVKAYAAN ASKPTATISF GGTVVGVKPA
501: PVVASFSARG PNGLVPEILK PDFIAPGVNI LAAWTGATGP TGLEGDTRRT EFNILSGTSM ACPHASGAAA LLRSAHPGWS PAAIRSALMT TAIVTDNRGG
601: PVGDEAEPGR VATPFDYGAG HITLGKALDP GLVYDAGEDD YVAFMCSIGY EPNAIEVVTH KPVTCPASTS RANGGSPSGS DLNYPSISVV LRSGNQSRTV
701: TRTVTNVGAQ ASATYTSRVQ MASTGAGVTV SVKPQKLVFS PGAKKQSFAV TVIAPSAPAT AAPVYGFLVW SDGGGHDVRS PIVVTWLQPM
Best Arabidopsis Sequence Match ( AT4G34980.1 )
(BLAST)
001: MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT
101: TRSPQFLGLQ NQKGLWSESD YGSDVIIGVF DTGIWPERRS FSDLNLGPIP KRWRGVCESG ARFSPRNCNR KIIGARFFAK GQQAAVIGGI NKTVEFLSPR
201: DADGHGTHTS STAAGRHAFK ASMSGYASGV AKGVAPKARI AAYKVCWKDS GCLDSDILAA FDAAVRDGVD VISISIGGGD GITSPYYLDP IAIGSYGAAS
301: KGIFVSSSAG NEGPNGMSVT NLAPWVTTVG ASTIDRNFPA DAILGDGHRL RGVSLYAGVP LNGRMFPVVY PGKSGMSSAS LCMENTLDPK QVRGKIVICD
401: RGSSPRVAKG LVVKKAGGVG MILANGASNG EGLVGDAHLI PACAVGSNEG DRIKAYASSH PNPIASIDFR GTIVGIKPAP VIASFSGRGP NGLSPEILKP
501: DLIAPGVNIL AAWTDAVGPT GLPSDPRKTE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AVIRSAMMTT TNLVDNSNRS LIDESTGKSA TPYDYGSGHL
601: NLGRAMNPGL VYDITNDDYI TFLCSIGYGP KTIQVITRTP VRCPTTRKPS PGNLNYPSIT AVFPTNRRGL VSKTVIRTAT NVGQAEAVYR ARIESPRGVT
701: VTVKPPRLVF TSAVKRRSYA VTVTVNTRNV VLGETGAVFG SVTWFDGGKH VVRSPIVVTQ MDTL
Arabidopsis Description
SBT1.6Subtilisin-like protease SBT1.6 [Source:UniProtKB/Swiss-Prot;Acc:O49607]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.