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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050092_P001 Maize mitochondrion 92.8 93.14
TraesCS3B01G455900.1 Wheat cytosol 48.57 87.87
TraesCS3D01G416100.1 Wheat extracellular 84.47 87.29
TraesCS3A01G420500.1 Wheat extracellular, plasma membrane 83.6 86.62
HORVU3Hr1G093190.2 Barley mitochondrion 84.72 80.52
Os08t0452100-00 Rice plastid 84.84 76.83
GSMUA_Achr7P19780_001 Banana extracellular, plasma membrane 53.04 74.39
GSMUA_Achr10P... Banana extracellular 60.62 74.16
CDX82491 Canola extracellular 63.23 66.36
CDX75757 Canola cytosol, plastid 33.17 66.25
KRH06267 Soybean plasma membrane 63.85 66.24
Bra001542.1-P Field mustard extracellular 63.11 66.23
KRH47696 Soybean extracellular, nucleus 64.1 65.98
AT3G14240.1 Thale cress extracellular, vacuole 63.35 65.81
KRH69016 Soybean extracellular, plasma membrane 62.73 65.58
Bra027353.1-P Field mustard extracellular 62.61 65.45
CDX97560 Canola extracellular 62.61 65.45
CDX98438 Canola extracellular 62.48 65.32
PGSC0003DMT400023608 Potato extracellular 63.48 65.1
KRG97289 Soybean extracellular, plasma membrane 61.99 64.97
Solyc03g123490.1.1 Tomato nucleus 62.98 64.83
EER92571 Sorghum extracellular, plasma membrane 50.81 51.77
EER94293 Sorghum extracellular 48.94 51.37
KXG38048 Sorghum extracellular 48.82 50.78
EER90842 Sorghum extracellular, plasma membrane 47.95 50.52
EER96794 Sorghum extracellular, plasma membrane 46.96 48.84
EES12694 Sorghum extracellular, golgi, plasma membrane 46.83 48.52
EES07654 Sorghum plastid 36.89 47.44
EES07632 Sorghum extracellular 46.34 47.4
EES05894 Sorghum extracellular 44.22 45.64
VIT_07s0005g00830.t01 Wine grape extracellular, plasma membrane 41.49 45.14
OQU93252 Sorghum extracellular 43.73 44.61
KXG35865 Sorghum extracellular, mitochondrion 41.74 41.18
EER90461 Sorghum extracellular, golgi 39.5 40.1
KXG33299 Sorghum plastid 40.12 39.06
KXG33202 Sorghum extracellular, plasma membrane, vacuole 39.01 38.91
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 38.63 38.88
OQU84580 Sorghum mitochondrion 40.25 36.4
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30EntrezGene:8077883
UniProt:C5YLS7EnsemblPlants:EES13951ProteinID:EES13951ProteinID:EES13951.1GO:GO:0003674GO:GO:0003824
GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008236
GO:GO:0016787GO:GO:0019538InterPro:IPR036852InterPro:IPR037045InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00136ScanProsite:PS00138PANTHER:PTHR42884
PANTHER:PTHR42884:SF4InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Asp-ASInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3007G147200SUPFAM:SSF52743SUPFAM:SSF54897
unigene:Sbi.16267SignalP:SignalP-noTMUniParc:UPI0001A879E3RefSeq:XP_002444456.1SEG:seg:
Description
hypothetical protein
Coordinates
chr7:+:57742254..57747203
Molecular Weight (calculated)
82325.8 Da
IEP (calculated)
7.936
GRAVY (calculated)
0.080
Length
805 amino acids
Sequence
(BLAST)
001: MPPPPHYYPV LLPLLVLAAV AGGGGGEADG LERTYIVRVD ADAKPSVYPT HAHWYEAAVL AAAGDGAGWP EGGPLIHTYS AAFHGFSARM SPAAAQALAS
101: APGVAAVVPE RVRQLATTRS PRFLGLLSSP PSALLADSDF GADLVIAIVD TGISPAHRSF HDRGLGPVPS RWRGVCASGP GFPPSACNRK LVGARFFSKG
201: YEATSGRMNE TAEVRSPLDT DGHGTHTASI AAGRYVFPAS TLGYARGVAA GMAPKARLAA YKVCWVGGCF DSDILAAFDA AVADGVDVVS LSVGGVVVPY
301: YLDAIAIGAF GATEAGIVVS ASAGNGGPGG LTVTNVAPWM ATVGAGSMDR AFPANVRLGD GQVLDGVSVY GGPALESGRM YELVYAGASG DGGGGASSAS
401: DGYSASMCLD GSLDPAAVHG KIVVCDRGVN SRAAKGDVVH RAGGIGMVLA NGAFDGEGLV ADCHVLPATA VGAAAGDRLR KYIASSTKQR PATGTILFEG
501: THLGVHPAPV VAAFSARGPN PQSPEILKPD LIAPGLNILA AWPSGVGPAG IPSDIRRTEF NILSGTSMAC PHVSGLAALL KAAHPTWSPA AIKSALMTTA
601: YVRDNSNGTM VDESTGAVAG AFDFGAGHVD PMRAMDPGLV YDIGPGDYVN FLCNLNYTEQ NIRAITRRQA DCRGARRAGH AGNLNYPSMS ATFVAAADGA
701: RETTTMRTHF IRTATNVGGG GKAVYRASVQ APEGCNVTVQ PRQLAFRRDG QRLSFTVRVE AAVAAAPGKR MEPGSSQVRS GALTWSDGRH VVRSPIVVTV
801: QAPLQ
Best Arabidopsis Sequence Match ( AT3G14240.1 )
(BLAST)
001: MAFFFYFFFL LTLSSPSSSA SSSNSLTYIV HVDHEAKPSI FPTHFHWYTS SLASLTSSPP SIIHTYDTVF HGFSARLTSQ DASQLLDHPH VISVIPEQVR
101: HLHTTRSPEF LGLRSTDKAG LLEESDFGSD LVIGVIDTGV WPERPSFDDR GLGPVPIKWK GQCIASQDFP ESACNRKLVG ARFFCGGYEA TNGKMNETTE
201: FRSPRDSDGH GTHTASISAG RYVFPASTLG YAHGVAAGMA PKARLAAYKV CWNSGCYDSD ILAAFDTAVA DGVDVISLSV GGVVVPYYLD AIAIGAFGAI
301: DRGIFVSASA GNGGPGALTV TNVAPWMTTV GAGTIDRDFP ANVKLGNGKM ISGVSVYGGP GLDPGRMYPL VYGGSLLGGD GYSSSLCLEG SLDPNLVKGK
401: IVLCDRGINS RATKGEIVRK NGGLGMIIAN GVFDGEGLVA DCHVLPATSV GASGGDEIRR YISESSKSRS SKHPTATIVF KGTRLGIRPA PVVASFSARG
501: PNPETPEILK PDVIAPGLNI LAAWPDRIGP SGVTSDNRRT EFNILSGTSM ACPHVSGLAA LLKAAHPDWS PAAIRSALIT TAYTVDNSGE PMMDESTGNT
601: SSVMDYGSGH VHPTKAMDPG LVYDITSYDY INFLCNSNYT RTNIVTITRR QADCDGARRA GHVGNLNYPS FSVVFQQYGE SKMSTHFIRT VTNVGDSDSV
701: YEIKIRPPRG TTVTVEPEKL SFRRVGQKLS FVVRVKTTEV KLSPGATNVE TGHIVWSDGK RNVTSPLVVT LQQPL
Arabidopsis Description
SBT1.5Subtilisin-like protease SBT1.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.