Factsheet for Solyc03g123490.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023608	Potato	extracellular	95.91	95.54
CDX75757	Canola	cytosol, plastid	38.87	75.43
KRH06267	Soybean	plasma membrane	74.42	75.0
KRH47696	Soybean	extracellular, nucleus	74.94	74.94
Bra001542.1-P	Field mustard	extracellular	73.4	74.84
CDX82491	Canola	extracellular	73.4	74.84
CDX97560	Canola	extracellular	73.53	74.68
CDX98438	Canola	extracellular	73.53	74.68
AT3G14240.1	Thale cress	extracellular, vacuole	73.79	74.45
Bra027353.1-P	Field mustard	extracellular	73.15	74.29
KRH69016	Soybean	extracellular, plasma membrane	71.99	73.12
KRG97289	Soybean	extracellular, plasma membrane	70.2	71.48
GSMUA_Achr10P...	Banana	extracellular	57.93	68.84
GSMUA_Achr7P19780_001	Banana	extracellular, plasma membrane	50.38	68.64
TraesCS3B01G455900.1	Wheat	cytosol	36.7	64.49
TraesCS3D01G416100.1	Wheat	extracellular	63.55	63.8
TraesCS3A01G420500.1	Wheat	extracellular, plasma membrane	63.17	63.58
Zm00001d050092_P001	Maize	mitochondrion	64.83	63.22
EES13951	Sorghum	extracellular	64.83	62.98
HORVU3Hr1G093190.2	Barley	mitochondrion	63.81	58.91
Os08t0452100-00	Rice	plastid	63.68	56.02
Solyc01g111400.2.1	Tomato	nucleus	54.6	55.31
Solyc02g021220.1.1	Tomato	extracellular, vacuole	51.41	50.63
Solyc04g078110.1.1	Tomato	extracellular	48.98	50.0
Solyc02g092670.1.1	Tomato	extracellular	48.08	49.87
Solyc02g092680.1.1	Tomato	extracellular	47.95	49.8
Solyc06g062950.1.1	Tomato	extracellular	48.98	49.36
Solyc03g006970.1.1	Tomato	nucleus	48.47	48.9
Solyc03g044150.2.1	Tomato	extracellular	47.83	48.51
Solyc07g041970.2.1	Tomato	extracellular	45.52	46.72
Solyc01g091920.2.1	Tomato	extracellular	44.76	46.17
Solyc08g067990.1.1	Tomato	extracellular	46.04	44.83
Solyc06g083720.1.1	Tomato	nucleus	42.71	43.32
Solyc02g071580.2.1	Tomato	nucleus	40.66	41.03
Solyc07g056170.2.1	Tomato	nucleus	40.15	40.57
Solyc02g071560.2.1	Tomato	extracellular, plasma membrane, vacuole	39.64	40.1
Solyc12g011140.1.1	Tomato	nucleus	38.36	38.86

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:K4BN48	InterPro:PA_domain	PFAM:PF00082
PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR42884	PANTHER:PTHR42884:SF4
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.A44
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g123490.1
EnsemblPlants:Solyc03g123490.1.1	UniParc:UPI0002765BF1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:70318819..70321167

Molecular Weight (calculated)

83020.9 Da

IEP (calculated)

7.783

GRAVY (calculated)

0.014

Length

782 amino acids

Sequence
(BLAST)

001: MAIFSFLLFC LSFLVFNGSV SSTANDLIRT FIVHVQHDAK PSIFPTHENW YESTLTSLTA DTQSLEIGAN RIIHTYSNVF HGFSVKLSTL DAQKLEDFDG
101: VLGVIPEQVR HIQTTRSPEF LGLTSADSAG LLKESDYGSD LVIGVIDTGI WPERKSFHDR DLGPVPAKWK GECVAARGFS ATSCNRKLIG ARYFSSGYEA
201: TNGKMNETIE FRSPRDSDGH GTHTASIAVG RYVFPASTLG YARGVAAGMA PKARLAAYKV CWSSGCYDAD ILAAFDAAVA DGVHVISLSV GGVVVPYNLD
301: AIAIASFAAT DAGIFVSASA GNGGPGGLTV TNVAPWVTNV GAGTIDRDFP ADVKLGNGRI VPGVSIYGGP ALTPNRLYPL IYAGSEGSDG YSSSLCLEGS
401: LNPNYVQGKI VLCDRGVNSR AAKGLVVKKA GGMGMIIANG VFDGEGLVAD CHVIPATAVG ASAGDEIRKY ISVASKSKSP PTATILFRGT LLNVRPAPVV
501: ASFSARGPNP ESPEILKPDV IAPGVNILAA WPDGVGPSGL PWDTRRTEFN ILSGTSMACP HVSGLGALLK AAHPGWSPAA IRSALMTTAY TVDNRGQIMM
601: DESTGNSSSV MDFGAGHVHP QKAMDPGLIY DLTSYDYVDF LCNSNYTTKN IQVVTRKYSD CSKAKRAGHV GNLNYPSLSA VFQQHGKHKL STHFIRTVTN
701: VGDPNSVYHV IVKPPRDMVV TVEPEKLTFR RVGQKLNFLV RVQAEALKLS PGNSIVKSGS IVWSDGKHEV TSPIVVTMQE PL

Best Arabidopsis Sequence Match ( AT3G14240.1 )
(BLAST)

001: MAFFFYFFFL LTLSSPSSSA SSSNSLTYIV HVDHEAKPSI FPTHFHWYTS SLASLTSSPP SIIHTYDTVF HGFSARLTSQ DASQLLDHPH VISVIPEQVR
101: HLHTTRSPEF LGLRSTDKAG LLEESDFGSD LVIGVIDTGV WPERPSFDDR GLGPVPIKWK GQCIASQDFP ESACNRKLVG ARFFCGGYEA TNGKMNETTE
201: FRSPRDSDGH GTHTASISAG RYVFPASTLG YAHGVAAGMA PKARLAAYKV CWNSGCYDSD ILAAFDTAVA DGVDVISLSV GGVVVPYYLD AIAIGAFGAI
301: DRGIFVSASA GNGGPGALTV TNVAPWMTTV GAGTIDRDFP ANVKLGNGKM ISGVSVYGGP GLDPGRMYPL VYGGSLLGGD GYSSSLCLEG SLDPNLVKGK
401: IVLCDRGINS RATKGEIVRK NGGLGMIIAN GVFDGEGLVA DCHVLPATSV GASGGDEIRR YISESSKSRS SKHPTATIVF KGTRLGIRPA PVVASFSARG
501: PNPETPEILK PDVIAPGLNI LAAWPDRIGP SGVTSDNRRT EFNILSGTSM ACPHVSGLAA LLKAAHPDWS PAAIRSALIT TAYTVDNSGE PMMDESTGNT
601: SSVMDYGSGH VHPTKAMDPG LVYDITSYDY INFLCNSNYT RTNIVTITRR QADCDGARRA GHVGNLNYPS FSVVFQQYGE SKMSTHFIRT VTNVGDSDSV
701: YEIKIRPPRG TTVTVEPEKL SFRRVGQKLS FVVRVKTTEV KLSPGATNVE TGHIVWSDGK RNVTSPLVVT LQQPL

Arabidopsis Description

SBT1.5Subtilisin-like protease SBT1.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.