Factsheet for Solyc03g006970.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019555	Potato	endoplasmic reticulum, extracellular, golgi	95.61	95.86
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	75.61	75.71
KRG91405	Soybean	nucleus	72.9	72.34
KRH35414	Soybean	nucleus	72.39	71.74
CDY00497	Canola	extracellular, plasma membrane	70.45	70.45
Bra028274.1-P	Field mustard	extracellular, plasma membrane	70.19	70.19
CDX99895	Canola	extracellular, plasma membrane	70.06	70.06
AT5G51750.1	Thale cress	extracellular, plasma membrane, vacuole	70.45	70.0
KRH09188	Soybean	nucleus	70.45	69.91
KRH38672	Soybean	nucleus	69.42	69.33
TraesCS2A01G398900.1	Wheat	golgi	65.68	65.51
TraesCS2B01G416900.1	Wheat	extracellular, plasma membrane	65.68	65.42
Zm00001d026068_P001	Maize	mitochondrion	65.55	65.38
EES12694	Sorghum	extracellular, golgi, plasma membrane	65.55	65.38
TraesCS2D01G396400.1	Wheat	golgi	65.29	65.12
GSMUA_Achr5P20160_001	Banana	extracellular	49.81	63.07
KRH62506	Soybean	extracellular	53.55	63.07
HORVU2Hr1G094670.1	Barley	extracellular	45.42	61.65
Solyc02g092670.1.1	Tomato	extracellular	53.16	54.64
Os04t0573300-00	Rice	extracellular	61.68	54.01
Solyc04g078110.1.1	Tomato	extracellular	52.9	53.52
Solyc03g044150.2.1	Tomato	extracellular	53.16	53.44
Solyc02g092680.1.1	Tomato	extracellular	51.23	52.72
Solyc07g041970.2.1	Tomato	extracellular	49.55	50.39
Solyc01g111400.2.1	Tomato	nucleus	50.19	50.39
Solyc06g062950.1.1	Tomato	extracellular	49.16	49.1
Solyc03g123490.1.1	Tomato	nucleus	48.9	48.47
Solyc01g091920.2.1	Tomato	extracellular	46.71	47.76
Solyc02g021220.1.1	Tomato	extracellular, vacuole	48.13	46.98
Solyc06g083720.1.1	Tomato	nucleus	45.68	45.91
Solyc08g067990.1.1	Tomato	extracellular	46.32	44.71
Solyc02g071580.2.1	Tomato	nucleus	40.39	40.39
Solyc07g056170.2.1	Tomato	nucleus	40.13	40.18
Solyc02g071560.2.1	Tomato	extracellular, plasma membrane, vacuole	38.45	38.55
Solyc12g011140.1.1	Tomato	nucleus	37.55	37.69

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	ProteinID:CAA07000.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045
UniProt:P93205	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723
ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF322	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS
InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.A25	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025
SUPFAM:SSF52743	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g006970.1	EnsemblPlants:Solyc03g006970.1.1	UniParc:UPI00000A82EB	EMBL:X98930
SEG:seg	:	:	:	:	:

Description

SBT2 protein [Source:UniProtKB/TrEMBL;Acc:P93205]

Coordinates

chr3:-:1528393..1530720

Molecular Weight (calculated)

83120.6 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.065

Length

775 amino acids

Sequence
(BLAST)

001: MAGMLLKCMF FFVSVCLAIN LAKCSPNTKK TYIIQMDKWA KPDVFVDHVQ WYSSLVKSVL PSTTEVEKTG DGEERILYSY QTAFHGVAAQ LSEEEVKKLQ
101: ERNGVLAVFP EIKYQLHTTR SPLFLGLDRE DSSKLWADRL SDHNVIVGVL DTGIWPESPS FNDSGMTSVP SHWKGVCETG RGFEKHHCSK KIVGARVFFR
201: GYEAASGKIN ERGEFKSARD QDGHGTHTAG TVAGSVVRGA NLLGYAYGTA RGMAPGARVA AYKVCWVGGC FSSDILSAVD QAVADGVNIL SISLGGGVSS
301: YNRDSLSIAA FGAMEKGVFV SCSAGNGGPD PISLTNVSPW ITTVGASTMD RDFPATVELG TGKIVTGASL YKGRMNLSTQ KQYPLIYLGS NSSNLMPSSL
401: CLDGTLDKAS VAGKIVICDR GISPRVQKGQ VVKEAGGVGM ILTNTAANGE ELVADSHLLP AVAVGEREGR AIKLYAAGRS ATATLRFLGT KLGIRPSPVV
501: AAFSSRGPNF LSLEILKPDM VAPGVNILAG WTGALGPSSL PIDQRRTNFN ILSGTSMSCP HVSGIAALLK ARHPDWSPAA IKSALMTTAY VHDNTYKSLK
601: DASSVTPSTP YDHGAGHVNP RKAVDPGLIY DIGAQDYFEF LCTQELSPSQ LMVFGKFSNR TCHHSLANPG DLNYPAISAV FPEKTKLSML TLHRTVTNVG
701: SPISNYHVVV SAFKGAVVKV EPERLNFTSK NQKLSYKVTF KTVSRQKAPE FGSLIWKDGT HKVRSPIAIT WLASV

Best Arabidopsis Sequence Match ( AT5G51750.1 )
(BLAST)

001: MANKNPLQKP FLFIILSINL IFLQAETTTQ ISTKKTYVIH MDKSAMPLPY TNHLQWYSSK INSVTQHKSQ EEEGNNNRIL YTYQTAFHGL AAQLTQEEAE
101: RLEEEDGVVA VIPETRYELH TTRSPTFLGL ERQESERVWA ERVTDHDVVV GVLDTGIWPE SESFNDTGMS PVPATWRGAC ETGKRFLKRN CNRKIVGARV
201: FYRGYEAATG KIDEELEYKS PRDRDGHGTH TAATVAGSPV KGANLFGFAY GTARGMAQKA RVAAYKVCWV GGCFSSDILS AVDQAVADGV QVLSISLGGG
301: VSTYSRDSLS IATFGAMEMG VFVSCSAGNG GPDPISLTNV SPWITTVGAS TMDRDFPATV KIGTMRTFKG VSLYKGRTVL PKNKQYPLVY LGRNASSPDP
401: TSFCLDGALD RRHVAGKIVI CDRGVTPRVQ KGQVVKRAGG IGMVLTNTAT NGEELVADSH MLPAVAVGEK EGKLIKQYAM TSKKATASLE ILGTRIGIKP
501: SPVVAAFSSR GPNFLSLEIL KPDLLAPGVN ILAAWTGDMA PSSLSSDPRR VKFNILSGTS MSCPHVSGVA ALIKSRHPDW SPAAIKSALM TTAYVHDNMF
601: KPLTDASGAA PSSPYDHGAG HIDPLRATDP GLVYDIGPQE YFEFLCTQDL SPSQLKVFTK HSNRTCKHTL AKNPGNLNYP AISALFPENT HVKAMTLRRT
701: VTNVGPHISS YKVSVSPFKG ASVTVQPKTL NFTSKHQKLS YTVTFRTRFR MKRPEFGGLV WKSTTHKVRS PVIITWLPPL

Arabidopsis Description

SBT1.3Subtilisin-like protease SBT1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.