Factsheet for Solyc01g111400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

nucleus: 25464976
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015864	Potato	extracellular	98.83	98.83
VIT_03s0038g02230.t01	Wine grape	extracellular	77.59	77.39
KRH24297	Soybean	nucleus	76.04	75.94
Bra017684.1-P	Field mustard	extracellular, plasma membrane	74.22	74.71
CDY40653	Canola	extracellular, vacuole	73.96	74.45
AT4G34980.1	Thale cress	extracellular, plasma membrane	73.58	74.35
CDX72509	Canola	extracellular, plasma membrane	72.41	73.84
KRH60704	Soybean	extracellular, plasma membrane	72.8	72.33
GSMUA_Achr2P11210_001	Banana	extracellular, plasma membrane, vacuole	62.44	68.86
Os03t0242900-01	Rice	extracellular, plasma membrane	63.86	63.21
TraesCS4B01G227400.1	Wheat	extracellular, plasma membrane	63.99	63.17
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	63.86	62.8
TraesCS4A01G071500.1	Wheat	extracellular, plasma membrane	63.34	62.53
Zm00001d028391_P001	Maize	extracellular	63.99	62.22
EER92571	Sorghum	extracellular, plasma membrane	63.6	62.15
HORVU4Hr1G063870.1	Barley	plastid	63.47	55.18
Solyc03g123490.1.1	Tomato	nucleus	55.31	54.6
Solyc06g062950.1.1	Tomato	extracellular	51.55	51.29
Solyc02g092670.1.1	Tomato	extracellular	49.61	50.8
Solyc03g006970.1.1	Tomato	nucleus	50.39	50.19
Solyc04g078110.1.1	Tomato	extracellular	49.48	49.87
Solyc02g092680.1.1	Tomato	extracellular	48.19	49.4
Solyc03g044150.2.1	Tomato	extracellular	49.09	49.16
Solyc07g041970.2.1	Tomato	extracellular	48.45	49.08
Solyc02g021220.1.1	Tomato	extracellular, vacuole	49.87	48.49
Solyc01g091920.2.1	Tomato	extracellular	45.73	46.57
Solyc08g067990.1.1	Tomato	extracellular	45.34	43.59
Solyc06g083720.1.1	Tomato	nucleus	43.26	43.32
Solyc02g071580.2.1	Tomato	nucleus	42.49	42.32
Solyc07g056170.2.1	Tomato	nucleus	41.71	41.6
Solyc02g071560.2.1	Tomato	extracellular, plasma membrane, vacuole	40.67	40.62
Solyc12g011140.1.1	Tomato	nucleus	40.54	40.54

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:K4B402
InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138
PANTHER:PTHR10795	PANTHER:PTHR10795:SF442	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3	MEROPS:S08.A39	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g111400.2	EnsemblPlants:Solyc01g111400.2.1	TMHMM:TMhelix	UniParc:UPI0002767556	SEG:seg

Description

Subtilisin-like protease SBT1.6 [Source:Projected from Arabidopsis thaliana (AT4G34980) UniProtKB/Swiss-Prot;Acc:O49607]

Coordinates

chr1:+:97660857..97663561

Molecular Weight (calculated)

81782.9 Da

IEP (calculated)

8.766

GRAVY (calculated)

0.043

Length

772 amino acids

Sequence
(BLAST)

001: MASLLLLTLF LCFTFTAIPF FSPVSAELEA KTYIFRVDSF SKPAVFPTHY HWYSSEFTEP VNILHVYDNV FHGFSASLSP FQAASVLQHP SILATFEDRR
101: RQLHTTRSPQ FLGLRNQKGL WSESDYGSDV IVGVLDTGIW PERRSFSDLN LGPVPTRWKG VCETGPQFTS RNCNRKIIGA RFFSKGHEAA PGFGPIGGGI
201: NDTVEFRSPR DADGHGTHTA STAAGRHAFR ASMSGYASGI AKGVAPKARL AVYKVCWKNS GCFDSDILAA FDAAVSDGVD VISISIGGGD GISSPYYLDP
301: IAIGAYGAVA RGVFVSSSAG NDGPNGMSVT NLAPWLTTVG AGTIDRNFPA EVILGDGRKL SGVSLYAGKP LNGKMYPIVY PGKSGVLSAS LCMENSLDPH
401: LVRGKIVICD RGSNPRVAKG LVVSKAGGVG MILTNGVSNG EGLVGDAHMI PTCAVGANEG DKIKAYISKN PTAAATINFH GTIIGVKPAP VVASFSGRGP
501: NGLNPEILKP DLIAPGVNIL AAWTDAVGPT GLDLDHRKAE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AAVRSAMMTT ANLVDNRLLP MTDEATGKPA
601: TPYDYGAGHL NLDLALDPGL VYDLANQDYV SFLCAIEYGP KTIQVITKSA VNCPMRKPLP ENLNYPSIAA LFSTATKGVS SKTFFRTVTN VGDANAVYRV
701: KIEAPKGVTV SVKPAKLGFS EKIRKLSYYV TITVDSKNLV LNDSGAVFGS LSWVDGKHVV RSPIVVTQMS PL

Best Arabidopsis Sequence Match ( AT4G34980.1 )
(BLAST)

001: MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT
101: TRSPQFLGLQ NQKGLWSESD YGSDVIIGVF DTGIWPERRS FSDLNLGPIP KRWRGVCESG ARFSPRNCNR KIIGARFFAK GQQAAVIGGI NKTVEFLSPR
201: DADGHGTHTS STAAGRHAFK ASMSGYASGV AKGVAPKARI AAYKVCWKDS GCLDSDILAA FDAAVRDGVD VISISIGGGD GITSPYYLDP IAIGSYGAAS
301: KGIFVSSSAG NEGPNGMSVT NLAPWVTTVG ASTIDRNFPA DAILGDGHRL RGVSLYAGVP LNGRMFPVVY PGKSGMSSAS LCMENTLDPK QVRGKIVICD
401: RGSSPRVAKG LVVKKAGGVG MILANGASNG EGLVGDAHLI PACAVGSNEG DRIKAYASSH PNPIASIDFR GTIVGIKPAP VIASFSGRGP NGLSPEILKP
501: DLIAPGVNIL AAWTDAVGPT GLPSDPRKTE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AVIRSAMMTT TNLVDNSNRS LIDESTGKSA TPYDYGSGHL
601: NLGRAMNPGL VYDITNDDYI TFLCSIGYGP KTIQVITRTP VRCPTTRKPS PGNLNYPSIT AVFPTNRRGL VSKTVIRTAT NVGQAEAVYR ARIESPRGVT
701: VTVKPPRLVF TSAVKRRSYA VTVTVNTRNV VLGETGAVFG SVTWFDGGKH VVRSPIVVTQ MDTL

Arabidopsis Description

SBT1.6Subtilisin-like protease SBT1.6 [Source:UniProtKB/Swiss-Prot;Acc:O49607]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.