Factsheet for TraesCS4B01G227400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 4
endoplasmic reticulum 3
vacuole 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	98.72	98.34
TraesCS4A01G071500.1	Wheat	extracellular, plasma membrane	98.34	98.34
Os03t0242900-01	Rice	extracellular, plasma membrane	87.72	87.95
HORVU4Hr1G063870.1	Barley	plastid	97.31	85.7
Zm00001d028391_P001	Maize	extracellular	85.81	84.51
EER92571	Sorghum	extracellular, plasma membrane	85.29	84.43
GSMUA_Achr2P11210_001	Banana	extracellular, plasma membrane, vacuole	62.02	69.29
VIT_03s0038g02230.t01	Wine grape	extracellular	64.07	64.73
PGSC0003DMT400015864	Potato	extracellular	63.68	64.51
Bra017684.1-P	Field mustard	extracellular, plasma membrane	62.79	64.02
Solyc01g111400.2.1	Tomato	nucleus	63.17	63.99
CDX72509	Canola	extracellular, plasma membrane	61.89	63.94
CDY40653	Canola	extracellular, vacuole	62.66	63.89
AT4G34980.1	Thale cress	extracellular, plasma membrane	62.4	63.87
KRH24297	Soybean	nucleus	63.04	63.78
KRH60704	Soybean	extracellular, plasma membrane	63.04	63.45
TraesCS4B01G077600.1	Wheat	extracellular	50.77	51.76
TraesCS5B01G404600.1	Wheat	golgi	49.49	50.65
TraesCS3B01G455900.1	Wheat	cytosol	28.64	50.34
TraesCS7B01G118600.1	Wheat	vacuole	48.98	49.87
TraesCS2B01G416900.1	Wheat	extracellular, plasma membrane	49.36	49.61
TraesCS5B01G209500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.21	48.77
TraesCS4B01G307400.1	Wheat	extracellular	48.72	47.92
TraesCS6B01G370300.1	Wheat	golgi	45.91	46.03
TraesCS6B01G369400.1	Wheat	extracellular	45.14	45.31
TraesCS6B01G370100.1	Wheat	extracellular	45.14	45.03
TraesCS6B01G368600.1	Wheat	extracellular	44.5	44.33
TraesCS6B01G368500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.5	44.27
TraesCS6B01G051400.1	Wheat	extracellular	44.25	43.85
TraesCS7B01G452500.1	Wheat	extracellular	43.09	43.15
TraesCS5B01G255200.1	Wheat	extracellular, plasma membrane	43.61	42.1
TraesCS3B01G317300.1	Wheat	unclear	41.82	41.98
TraesCS6B01G370000.1	Wheat	peroxisome, plastid, vacuole	44.25	41.74
TraesCS5B01G024600.1	Wheat	extracellular, plasma membrane, vacuole	39.26	39.77
TraesCS2B01G050700.2	Wheat	cytosol	35.17	39.29
TraesCS2B01G050800.1	Wheat	extracellular, plasma membrane	37.72	38.06
TraesCS7B01G283300.1	Wheat	extracellular, plasma membrane	38.75	37.97
TraesCS3B01G286900.1	Wheat	extracellular, plasma membrane	31.46	31.54

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF442	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G227400
EnsemblPlants:TraesCS4B01G227400.1	TIGR:cd02120	TIGR:cd04852	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:+:476063802..476066150

Molecular Weight (calculated)

80477.7 Da

IEP (calculated)

8.387

GRAVY (calculated)

0.090

Length

782 amino acids

Sequence
(BLAST)

001: MAARRRLLLL LLALAPALSQ TVLGVSGGGQ ARKTYIFRVD HRAKPSVFPT HAHWYSSAAF ASAAASADGP LEPLHVYDTV FHGFSASLSA SRAEELRRHP
101: AVLAAFEDRV RQLHTTRSPQ FMGLRARLGL WSLADYGSDV IVGVLDTGVW PERRSLSDRN LPPVPARWRG GCDAGPAFLA SSCNKKLVGA RFFSQGHAAH
201: YGVEAAASNG SVEYMSPRDA DGHGTHTATT AAGSVSYAAS MEGYASGVAK GVAPKARVAA YKVCWKGAGC LDSDILAGFD RAVADGVDVI SVSIGGGNGA
301: VSPFYIDPIA IGSYGAVSRG VFVATSAGNE GPAPMSVTNL APWIATVGAG TIDRNFPAEI VLGDGRRMSG VSLYSGKPLA NNTMLSLYYP GRSGGLSASL
401: CMENSIDPSL VAGKIVICDR GSSPRVAKGM VVKEAGGAAM VLANGEANGE GLVGDAHVLP ACSVGENEGD ALKAYAANTT NPTATIVFRG TVIGVKPAPL
501: VASFSARGPN GLVPEILKPD FIAPGVNILA AWTGATGPTG LEADARRTEF NILSGTSMAC PHASGAAALL RSAHPEWSPA AIRSALMTTA IVTDNRGGAV
601: ADEAEPGRAA TPFDYGAGHI ALGKALDPGL VYDIGDEDYV AFMCSIGYAA NAIEVITHKP VACPAATGRK PSGSDLNYPS ISVVLYGGNQ SKTVIRTATN
701: VGAEASATYK ARVEMASGGV SVAVKPEKLV FSPSAKKQSF AVTVSAASAP STAAPVHGHL VWSDGRGHDV RSPIVVTWLQ PM

Best Arabidopsis Sequence Match ( AT4G34980.1 )
(BLAST)

001: MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT
101: TRSPQFLGLQ NQKGLWSESD YGSDVIIGVF DTGIWPERRS FSDLNLGPIP KRWRGVCESG ARFSPRNCNR KIIGARFFAK GQQAAVIGGI NKTVEFLSPR
201: DADGHGTHTS STAAGRHAFK ASMSGYASGV AKGVAPKARI AAYKVCWKDS GCLDSDILAA FDAAVRDGVD VISISIGGGD GITSPYYLDP IAIGSYGAAS
301: KGIFVSSSAG NEGPNGMSVT NLAPWVTTVG ASTIDRNFPA DAILGDGHRL RGVSLYAGVP LNGRMFPVVY PGKSGMSSAS LCMENTLDPK QVRGKIVICD
401: RGSSPRVAKG LVVKKAGGVG MILANGASNG EGLVGDAHLI PACAVGSNEG DRIKAYASSH PNPIASIDFR GTIVGIKPAP VIASFSGRGP NGLSPEILKP
501: DLIAPGVNIL AAWTDAVGPT GLPSDPRKTE FNILSGTSMA CPHVSGAAAL LKSAHPDWSP AVIRSAMMTT TNLVDNSNRS LIDESTGKSA TPYDYGSGHL
601: NLGRAMNPGL VYDITNDDYI TFLCSIGYGP KTIQVITRTP VRCPTTRKPS PGNLNYPSIT AVFPTNRRGL VSKTVIRTAT NVGQAEAVYR ARIESPRGVT
701: VTVKPPRLVF TSAVKRRSYA VTVTVNTRNV VLGETGAVFG SVTWFDGGKH VVRSPIVVTQ MDTL

Arabidopsis Description

SBT1.6Subtilisin-like protease SBT1.6 [Source:UniProtKB/Swiss-Prot;Acc:O49607]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.