Factsheet for TraesCS6B01G370300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

golgi: 23128297
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G319700.1	Wheat	golgi	96.67	95.69
TraesCS6A01G339400.1	Wheat	extracellular, golgi	96.03	95.66
Os02t0779200-01	Rice	extracellular	77.95	77.75
HORVU5Hr1G027960.1	Barley	plastid	44.62	77.68
EES07632	Sorghum	extracellular	78.33	77.64
HORVU6Hr1G081850.2	Barley	cytosol, plastid	78.46	77.37
Zm00001d018282_P001	Maize	extracellular	77.44	77.14
GSMUA_Achr6P03640_001	Banana	plastid	51.54	63.91
CDX97539	Canola	plastid	38.46	62.37
Solyc06g062950.1.1	Tomato	extracellular	61.79	62.11
PGSC0003DMT400012537	Potato	extracellular	61.03	61.34
PGSC0003DMT400088012	Potato	extracellular	59.87	60.89
VIT_09s0002g01040.t01	Wine grape	extracellular	57.44	58.11
TraesCS6B01G369400.1	Wheat	extracellular	57.95	58.02
TraesCS6B01G368500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	58.33	57.89
KRH47618	Soybean	extracellular	57.44	57.81
TraesCS6B01G370100.1	Wheat	extracellular	58.08	57.78
TraesCS6B01G368600.1	Wheat	extracellular	57.44	57.07
CDY33251	Canola	plasma membrane	56.67	57.03
AT3G14067.1	Thale cress	plasma membrane	56.41	56.63
Bra021529.1-P	Field mustard	plasma membrane	56.15	56.52
CDY39093	Canola	plasma membrane	56.15	56.52
TraesCS6B01G051400.1	Wheat	extracellular	57.05	56.4
Bra027376.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.03	56.31
TraesCS7B01G452500.1	Wheat	extracellular	56.28	56.21
CDY52259	Canola	extracellular, plasma membrane, vacuole	52.95	56.11
TraesCS6B01G370000.1	Wheat	peroxisome, plastid, vacuole	58.72	55.25
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	55.26	54.7
TraesCS4B01G077600.1	Wheat	extracellular	49.87	50.72
TraesCS7B01G118600.1	Wheat	vacuole	46.92	47.66
TraesCS5B01G404600.1	Wheat	golgi	46.54	47.51
TraesCS5B01G209500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.05	47.48
TraesCS2B01G416900.1	Wheat	extracellular, plasma membrane	47.05	47.17
TraesCS3B01G455900.1	Wheat	cytosol	26.28	46.07
TraesCS4B01G227400.1	Wheat	extracellular, plasma membrane	46.03	45.91
TraesCS4B01G307400.1	Wheat	extracellular	42.05	41.26
TraesCS3B01G317300.1	Wheat	unclear	40.64	40.69
TraesCS5B01G255200.1	Wheat	extracellular, plasma membrane	42.18	40.62
TraesCS7B01G283300.1	Wheat	extracellular, plasma membrane	40.9	39.97
TraesCS2B01G050800.1	Wheat	extracellular, plasma membrane	39.23	39.48
TraesCS2B01G050700.2	Wheat	cytosol	35.26	39.29
TraesCS5B01G024600.1	Wheat	extracellular, plasma membrane, vacuole	36.41	36.79
TraesCS3B01G286900.1	Wheat	extracellular, plasma membrane	35.13	35.13
KRH06199	Soybean	endoplasmic reticulum, nucleus	58.72	32.1

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00136	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF331
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Asp-AS	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6B01G370300	EnsemblPlants:TraesCS6B01G370300.1	TIGR:cd02120	TIGR:cd04852	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:643896917..643899259

Molecular Weight (calculated)

80751.6 Da

IEP (calculated)

6.466

GRAVY (calculated)

0.050

Length

780 amino acids

Sequence
(BLAST)

001: MASRKQLLLP CLVLLFVAAA AVADAAPQST YILHLAPDHP ALSLSPARGG RNALLGPLLG LPRRLSAPRP RLLYTYARAA TGVAARLTEA QAAHVAAQPG
101: VLAVHRDEAR QLHTTHTPEF LHLNGAAGLL PAASGAVSDV VVGVLDTGIY PLNRSSFKPV GDGLGPPPSS FSGGCVSAAK FNASAFCNSK LIGAKFFYKG
201: YEEALGHPIN ETLESKSPLD TEGHGTHTAS TAAGSPVDGA GFYDYARGRA VGMAPTARIA AYKICWKGGC LDSDILAAFD EAVGDGVNVI SLSVGSSYAA
301: DFYQDSIAIG AFGAVKKGIV VSASAGNSGP GEYTASNIAP WILTVGASTV DREFPADAVL GDGSVYGGVS LYAGDPLNST KLPLVYAADC GSRLCLIGEL
401: DKDKVAGKIV LCERGVNARV EKGAAVGKAG GIGMILANTE ESGEELIADP HLIPSTMVGQ KFGDKIRHYV KTDPSPTATI VFHGTVIGKS PSAPRVASFS
501: SRGPNSRAAE ILKPDVTAPG VNILAAWTGE ASPTDLDIDP RRVPFNIISG TSMSCPHVSG LAALLRQAHP EWSPAAVKSA LMTTAYNLDN SGEIIKDLAT
601: GTESTPFVRG AGHVDPNSAL DPGLVYDADT ADYIGFLCAL GYTPSQIAVF TRDGSVADCS KKPARSGDLN YPAFAAVFSS YKDSVTYHRV VRNVGGDANA
701: VYEAKVESPA GVDAKVTPAK LVFDEEHRSL AYEITLGVSG NPVIVDTKYS FGSVTWSDGK HNVTSPIAVT WPESAGAASM

Best Arabidopsis Sequence Match ( AT3G14067.1 )
(BLAST)

001: MAKLSLSSIF FVFPLLLCFF SPSSSSSDGL ESYIVHVQRS HKPSLFSSHN NWHVSLLRSL PSSPQPATLL YSYSRAVHGF SARLSPIQTA ALRRHPSVIS
101: VIPDQAREIH TTHTPAFLGF SQNSGLWSNS NYGEDVIVGV LDTGIWPEHP SFSDSGLGPI PSTWKGECEI GPDFPASSCN RKLIGARAFY RGYLTQRNGT
201: KKHAAKESRS PRDTEGHGTH TASTAAGSVV ANASLYQYAR GTATGMASKA RIAAYKICWT GGCYDSDILA AMDQAVADGV HVISLSVGAS GSAPEYHTDS
301: IAIGAFGATR HGIVVSCSAG NSGPNPETAT NIAPWILTVG ASTVDREFAA NAITGDGKVF TGTSLYAGES LPDSQLSLVY SGDCGSRLCY PGKLNSSLVE
401: GKIVLCDRGG NARVEKGSAV KLAGGAGMIL ANTAESGEEL TADSHLVPAT MVGAKAGDQI RDYIKTSDSP TAKISFLGTL IGPSPPSPRV AAFSSRGPNH
501: LTPVILKPDV IAPGVNILAG WTGMVGPTDL DIDPRRVQFN IISGTSMSCP HVSGLAALLR KAHPDWSPAA IKSALVTTAY DVENSGEPIE DLATGKSSNS
601: FIHGAGHVDP NKALNPGLVY DIEVKEYVAF LCAVGYEFPG ILVFLQDPTL YDACETSKLR TAGDLNYPSF SVVFASTGEV VKYKRVVKNV GSNVDAVYEV
701: GVKSPANVEI DVSPSKLAFS KEKSVLEYEV TFKSVVLGGG VGSVPGHEFG SIEWTDGEHV VKSPVAVQWG QGSVQSF

Arabidopsis Description

SBT1.4Subtilisin-like protease SBT1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.