Factsheet for TraesCS6D01G319700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G370300.1	Wheat	golgi	95.69	96.67
TraesCS6A01G339400.1	Wheat	extracellular, golgi	94.04	94.64
HORVU6Hr1G081850.2	Barley	cytosol, plastid	77.67	77.37
Os02t0779200-01	Rice	extracellular	76.65	77.24
HORVU5Hr1G027960.1	Barley	plastid	43.78	77.01
EES07632	Sorghum	extracellular	76.9	77.0
Zm00001d018282_P001	Maize	extracellular	76.02	76.5
GSMUA_Achr6P03640_001	Banana	plastid	50.51	63.27
CDX97539	Canola	plastid	38.07	62.37
Solyc06g062950.1.1	Tomato	extracellular	60.91	61.86
PGSC0003DMT400012537	Potato	extracellular	60.03	60.95
PGSC0003DMT400088012	Potato	extracellular	59.14	60.76
TraesCS6D01G318700.1	Wheat	cytosol	51.02	60.36
TraesCS6D01G319800.1	Wheat	unclear	57.74	58.04
VIT_09s0002g01040.t01	Wine grape	extracellular	56.6	57.85
KRH47618	Soybean	extracellular	56.6	57.55
CDY33251	Canola	plasma membrane	56.22	57.16
Bra021529.1-P	Field mustard	plasma membrane	55.71	56.65
CDY39093	Canola	plasma membrane	55.71	56.65
AT3G14067.1	Thale cress	plasma membrane	55.84	56.63
Bra027376.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.46	56.31
CDY52259	Canola	extracellular, plasma membrane, vacuole	52.54	56.25
TraesCS5D01G322200.1	Wheat	extracellular	55.58	55.87
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	54.57	54.57
TraesCS6D01G319900.2	Wheat	golgi, unclear	57.36	54.2
TraesCS4D01G076000.1	Wheat	extracellular	47.97	49.48
TraesCS7D01G213300.1	Wheat	vacuole	46.7	47.92
TraesCS5D01G409600.1	Wheat	unclear	46.45	47.91
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.57	47.54
TraesCS2D01G396400.1	Wheat	golgi	46.83	47.49
TraesCS3D01G416100.1	Wheat	extracellular	45.18	45.7
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	44.8	44.97
TraesCS4D01G305500.1	Wheat	extracellular	41.5	41.03
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	40.1	40.62
TraesCS5D01G264000.1	Wheat	nucleus	41.62	40.44
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	40.61	39.6
TraesCS3D01G255800.1	Wheat	vacuole	37.56	39.41
TraesCS2D01G036400.1	Wheat	plasma membrane	38.45	39.0
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	37.44	38.92
TraesCS5D01G033200.1	Wheat	cytosol	35.66	37.57
TraesCS2D01G036500.1	Wheat	plasma membrane	37.94	37.33
KRH06199	Soybean	endoplasmic reticulum, nucleus	57.87	31.96

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00136	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF331
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Asp-AS	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6D01G319700
EnsemblPlants:TraesCS6D01G319700.1	TIGR:cd02120	TIGR:cd04852	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:-:427568103..427570698

Molecular Weight (calculated)

81774.9 Da

IEP (calculated)

6.638

GRAVY (calculated)

0.045

Length

788 amino acids

Sequence
(BLAST)

001: MAMASRKQLL LPCLILLFVA AAAVAEASPR AQPQSTYIVH LAPDHPALSL SPARGGRNAL LGPLLGLPRR LSAPRPRLLY TYARAATGVA ARLTEAQAAH
101: VAAQPGVLAV HRDQARQLHT THTPEFLHLN SAAGVLPAAS GSGAVSDVVV GVLDTGIYPL NRSSFKPVGD GLGPPPSSFS GGCVSAAKFN ASAFCNSKLI
201: GAKFFYKGYE EGLGHPINET LESKSPLDTE GHGTHTASTA AGSPVDGAGF YQYARGRAVG MAPTARIAAY KICWKSGCFD SDILAAFDEA VGDGVNVISL
301: SVGSTYAADF YEDSIAIGAF GAVKKGIVVS ASAGNSGPGE YTASNIAPWI LTVGASTVDR EFPADAVLGD GSVYGGVSLY AGDPLNSTKL PLVYAADCGS
401: RLCLIGELDK DKVAGKIVLC ERGVNARVEK GAAVGKAGGI GMILANTEES GEELIADPHL IPSTMVGQKF GDKIRHYVKT DPSPTATIVF HGTVIGKSPS
501: APRVASFSSR GPNSRAPEIL KPDVTAPGVN ILADWTGEAS PTDLDIDPRR VPFNIISGTS MSCPHVSGLA ALLRQAHPDW SPTVVKSALM TTAYNMDNSG
601: EIIKDLATGT ESTPFVRGAG HVDPISALNP GLVYDADTAD YIGFLCALGY TPAQIAVFTR DGSVADCSKK PARSGDLNYP AFAAVFSSYK DSVTYHRVVR
701: NVGSDASAVY EAKVESPAGV DAKVTPAKLV FDEEHRSLAY EITLAVSGNP VIVDAKYSFG SVTWSDGKHN VTSPIAVTWP ESAGAASM

Best Arabidopsis Sequence Match ( AT3G14067.1 )
(BLAST)

001: MAKLSLSSIF FVFPLLLCFF SPSSSSSDGL ESYIVHVQRS HKPSLFSSHN NWHVSLLRSL PSSPQPATLL YSYSRAVHGF SARLSPIQTA ALRRHPSVIS
101: VIPDQAREIH TTHTPAFLGF SQNSGLWSNS NYGEDVIVGV LDTGIWPEHP SFSDSGLGPI PSTWKGECEI GPDFPASSCN RKLIGARAFY RGYLTQRNGT
201: KKHAAKESRS PRDTEGHGTH TASTAAGSVV ANASLYQYAR GTATGMASKA RIAAYKICWT GGCYDSDILA AMDQAVADGV HVISLSVGAS GSAPEYHTDS
301: IAIGAFGATR HGIVVSCSAG NSGPNPETAT NIAPWILTVG ASTVDREFAA NAITGDGKVF TGTSLYAGES LPDSQLSLVY SGDCGSRLCY PGKLNSSLVE
401: GKIVLCDRGG NARVEKGSAV KLAGGAGMIL ANTAESGEEL TADSHLVPAT MVGAKAGDQI RDYIKTSDSP TAKISFLGTL IGPSPPSPRV AAFSSRGPNH
501: LTPVILKPDV IAPGVNILAG WTGMVGPTDL DIDPRRVQFN IISGTSMSCP HVSGLAALLR KAHPDWSPAA IKSALVTTAY DVENSGEPIE DLATGKSSNS
601: FIHGAGHVDP NKALNPGLVY DIEVKEYVAF LCAVGYEFPG ILVFLQDPTL YDACETSKLR TAGDLNYPSF SVVFASTGEV VKYKRVVKNV GSNVDAVYEV
701: GVKSPANVEI DVSPSKLAFS KEKSVLEYEV TFKSVVLGGG VGSVPGHEFG SIEWTDGEHV VKSPVAVQWG QGSVQSF

Arabidopsis Description

SBT1.4Subtilisin-like protease SBT1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.