Factsheet for TraesCS5D01G264000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 4
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G255200.1	Wheat	extracellular, plasma membrane	95.81	95.93
TraesCS5A01G255900.1	Wheat	extracellular, mitochondrion, vacuole	95.56	95.33
HORVU5Hr1G071510.2	Barley	extracellular, plasma membrane	94.08	93.97
Os09t0479900-01	Rice	golgi	80.89	81.49
Zm00001d020867_P001	Maize	cytosol	67.32	80.65
KXG35865	Sorghum	extracellular, mitochondrion	77.81	77.33
GSMUA_Achr4P01730_001	Banana	cytosol	64.61	67.79
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	44.14	62.37
PGSC0003DMT400044595	Potato	extracellular, plasma membrane	39.83	61.64
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	57.71	60.94
KRH58852	Soybean	nucleus	56.97	59.77
Solyc07g056170.2.1	Tomato	nucleus	56.97	59.69
KRH42754	Soybean	extracellular, vacuole	56.72	59.51
CDY15084	Canola	extracellular, vacuole	56.72	59.35
CDY65487	Canola	extracellular, vacuole	56.47	59.1
Bra013212.1-P	Field mustard	extracellular, vacuole	56.35	58.97
CDY65695	Canola	plastid	39.21	58.78
AT5G59810.1	Thale cress	mitochondrion	55.86	58.23
CDY65693	Canola	extracellular, golgi	54.62	58.06
AT2G04160.1	Thale cress	extracellular, vacuole	55.12	57.9
Bra020285.1-P	Field mustard	extracellular, plasma membrane	54.38	57.8
CDY40408	Canola	extracellular	54.38	57.42
CDY37334	Canola	extracellular	54.38	57.35
Bra014350.1-P	Field mustard	extracellular	54.25	57.29
Solyc12g011140.1.1	Tomato	nucleus	53.76	56.48
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	54.5	54.7
KRH51225	Soybean	extracellular, plasma membrane	52.03	54.59
KRH01924	Soybean	cytosol, nucleus	25.28	54.09
TraesCS5D01G033200.1	Wheat	cytosol	48.58	52.67
KRH03962	Soybean	extracellular, vacuole	50.06	52.59
KRH14771	Soybean	nucleus	48.34	50.06
KRH14773	Soybean	endoplasmic reticulum, extracellular, vacuole	48.21	49.94
KRH14769	Soybean	extracellular	47.1	48.54
KRH40182	Soybean	extracellular, vacuole	47.1	48.54
TraesCS3D01G255800.1	Wheat	vacuole	43.9	47.4
KRH01039	Soybean	nucleus	45.99	46.34
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	44.27	46.14
TraesCS4D01G076000.1	Wheat	extracellular	42.91	45.55
TraesCS2D01G036400.1	Wheat	plasma membrane	42.79	44.66
TraesCS2D01G036500.1	Wheat	plasma membrane	43.65	44.19
TraesCS6D01G318700.1	Wheat	cytosol	36.13	43.99
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	40.81	43.67
TraesCS7D01G213300.1	Wheat	vacuole	41.31	43.62
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	42.17	43.57
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.31	43.39
TraesCS5D01G409600.1	Wheat	unclear	40.57	43.06
TraesCS3D01G416100.1	Wheat	extracellular	40.81	42.49
TraesCS2D01G396400.1	Wheat	golgi	40.44	42.21
TraesCS4D01G305500.1	Wheat	extracellular	40.94	41.66
TraesCS6D01G319700.1	Wheat	golgi	40.44	41.62
TraesCS5D01G322200.1	Wheat	extracellular	38.96	40.31
TraesCS6D01G319800.1	Wheat	unclear	38.96	40.31
TraesCS6D01G319900.2	Wheat	golgi, unclear	39.95	38.85

Protein Annotations

MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF423	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G264000	EnsemblPlants:TraesCS5D01G264000.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:369291221..369297810

Molecular Weight (calculated)

86236.4 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.209

Length

811 amino acids

Sequence
(BLAST)

001: MRRGMHSSVK KSSPRAPPLA PVLLLICGLS LLQRPASAEI KSYVVYLGFH SHGREGAALA SNQERAKNSH YQFLGSVLGS EEKAQDAIFY SYTRYINGFA
101: ATLEEEDAMQ ISKHPSVISV FPNRGHKLHT TRSWEFLGME KDGRVRPNSI WAKARYGEGV IIGNLDTGVW PEAGSFSDDG MGPVPARWRG VCHDQSSSDD
201: AQVRCNRKLI GAQYFNKGYA ATVGRAGAGA SPASTRDSDG HGTHTLSTAA GRFVPGANLF GYGNGTAKGG APGARVAAYK VCWRPVNGSE CFDADIIAAF
301: DAAIHDGVDV LSVSLGGAPT DYFRDGVAIG SFHAVRNGVT VVTSAGNSGP GAGTVSNTAP WLVTVGASTM DREFPAYLVL GNKKRIKGQS LSPVPLPANK
401: HYRLISSVEA KAEDATVAQA QLCMEGSLDK KKARGKIVVC MRGKNARVEK GEAVHRAGGV GLVLANDEAT GNEMIADAHV LPATHITYSD GVALLAYMNS
501: TRLASGYITL PNTALETKPA PFMAAFSSQG PNTVTPQILK PDITAPGVSI LAAFTGLAGP TGLTFDSRRV LFNSESGTSM SCPHVAGIAG LLKALHPDWS
601: PAAIKSAIMT TTRVQDNTRR PMSNSSFLRA TPFAYGAGHV QPNRAADPGL VYDTNATDYL HFLCALGYNS TVIGTFMDGP NACPARPRKP EDLNYPSVTV
701: PHLSASGEPR TVTRRVRNVG AEPAAYDVRV REPRGVSVSV RPSRLEFAAA GEEKEFAVTF RARAGRFLPG EYVFGQMVWS DGAGRRRHRV RSPVVVRVGA
801: HRTSKTSVPV A

Best Arabidopsis Sequence Match ( AT5G59810.1 )
(BLAST)

001: MSMTRRYSST QYSNKMSLQS LSSLLLLVTL FFSPAFALKK SYIVYLGSHA HLPQISSAHL DGVAHSHRTF LASFVGSHEN AKEAIFYSYK RHINGFAAIL
101: DENEAAEIAK HPDVVSVFPN KGRKLHTTHS WNFMLLAKNG VVHKSSLWNK AGYGEDTIIA NLDTGVWPES KSFSDEGYGA VPARWKGRCH KDVPCNRKLI
201: GARYFNKGYL AYTGLPSNAS YETCRDHDGH GSHTLSTAAG NFVPGANVFG IGNGTASGGS PKARVAAYKV CWPPVDGAEC FDADILAAIE AAIEDGVDVL
301: SASVGGDAGD YMSDGIAIGS FHAVKNGVTV VCSAGNSGPK SGTVSNVAPW VITVGASSMD REFQAFVELK NGQSFKGTSL SKPLPEEKMY SLISAADANV
401: ANGNVTDALL CKKGSLDPKK VKGKILVCLR GDNARVDKGM QAAAAGAAGM VLCNDKASGN EIISDAHVLP ASQIDYKDGE TLFSYLSSTK DPKGYIKAPT
501: ATLNTKPAPF MASFSSRGPN TITPGILKPD ITAPGVNIIA AFTEATGPTD LDSDNRRTPF NTESGTSMSC PHISGVVGLL KTLHPHWSPA AIRSAIMTTS
601: RTRNNRRKPM VDESFKKANP FSYGSGHVQP NKAAHPGLVY DLTTGDYLDF LCAVGYNNTV VQLFAEDPQY TCRQGANLLD FNYPSITVPN LTGSITVTRK
701: LKNVGPPATY NARFREPLGV RVSVEPKQLT FNKTGEVKIF QMTLRPLPVT PSGYVFGELT WTDSHHYVRS PIVVQLSS

Arabidopsis Description

SBT5.4Subtilisin-like protease SBT5.4 [Source:UniProtKB/Swiss-Prot;Acc:F4JXC5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.