Factsheet for TraesCS6D01G319800.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G339200.1	Wheat	extracellular, unclear	95.92	95.92
TraesCS6B01G370100.1	Wheat	extracellular	95.28	95.28
TraesCS6D01G318700.1	Wheat	cytosol	70.03	82.43
TraesCS6D01G319900.2	Wheat	golgi, unclear	84.69	79.62
TraesCS5D01G322200.1	Wheat	extracellular	72.45	72.45
Zm00001d052104_P001	Maize	extracellular	71.68	72.05
EES05894	Sorghum	extracellular	71.05	71.41
EES07654	Sorghum	plastid	55.36	69.33
Zm00001d018281_P001	Maize	plasma membrane	67.98	67.73
TraesCS6D01G319700.1	Wheat	golgi	58.04	57.74
GSMUA_Achr6P03640_001	Banana	plastid	44.64	55.64
CDX97539	Canola	plastid	32.53	53.01
VIT_09s0002g01040.t01	Wine grape	extracellular	51.4	52.27
PGSC0003DMT400088012	Potato	extracellular	50.77	51.89
KRH47618	Soybean	extracellular	51.02	51.61
PGSC0003DMT400012537	Potato	extracellular	51.02	51.55
Solyc06g062950.1.1	Tomato	extracellular	50.89	51.42
Os02t0779000-00	Rice	extracellular	42.09	51.32
Os02t0780200-01	Rice	extracellular	51.66	51.27
CDY33251	Canola	plasma membrane	50.0	50.58
Bra027376.1-P	Field mustard	extracellular, plasma membrane, vacuole	50.0	50.52
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	50.77	50.51
CDY52259	Canola	extracellular, plasma membrane, vacuole	47.19	50.27
Bra021529.1-P	Field mustard	plasma membrane	49.62	50.19
CDY39093	Canola	plasma membrane	49.62	50.19
AT3G14067.1	Thale cress	plasma membrane	49.23	49.68
TraesCS4D01G076000.1	Wheat	extracellular	47.07	48.3
TraesCS7D01G213300.1	Wheat	vacuole	45.41	46.35
TraesCS5D01G409600.1	Wheat	unclear	44.13	45.29
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	44.77	44.71
TraesCS2D01G396400.1	Wheat	golgi	44.13	44.53
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.22	42.88
TraesCS3D01G416100.1	Wheat	extracellular	42.47	42.75
TraesCS4D01G305500.1	Wheat	extracellular	40.82	40.15
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	38.9	39.2
TraesCS5D01G264000.1	Wheat	nucleus	40.31	38.96
TraesCS5D01G033200.1	Wheat	cytosol	36.73	38.5
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	36.99	38.26
TraesCS2D01G036500.1	Wheat	plasma membrane	38.78	37.95
TraesCS2D01G036400.1	Wheat	plasma membrane	37.5	37.84
TraesCS3D01G255800.1	Wheat	vacuole	36.22	37.82
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	38.65	37.5
KRH06199	Soybean	endoplasmic reticulum, nucleus	51.28	28.17

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF406	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G319800	EnsemblPlants:TraesCS6D01G319800.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:427698278..427700632

Molecular Weight (calculated)

81186.1 Da

IEP (calculated)

7.326

GRAVY (calculated)

0.052

Length

784 amino acids

Sequence
(BLAST)

001: MELLRPFAAL CVLLGFFVAA AAMAAPEVVS ETAEAQSSYI VHVAAAHAPR LPRRGLLATR AYGAFLRDQL PVELSSPAPR VLYSYAHAAT GFAAQLTGRQ
101: AAQLASSGSV LAVVPDVMQQ LHTTLTPSFL GLSPSYGLLK VSNGATDVII GVIDTGVYPE GRKSFAADPS LPPPPSKFRG ACVSGPSFNA SALCNNKLVG
201: AKFFHKGLEA ARGRALGEDS LSPLDTNGHG THTSSTAGGS PAADAGFFDY ARGKAVGMAP GARIAVYKAC WEEGCASSDI LAAFDEAITD RVDVISVSLG
301: DTGLADNFYS DTTAVGAFRA VSKGIVVSAS AGNSGPGDST AVNIAPWILT VGASTLNRRF PGDVVLGNGE TFTGTTLYAG EPLVATNLPV VYGGDVGSKV
401: CEEGKLKPAK VAGKIVFCEL GVTAQAAKGQ AVKLAGGAGA ILTGAKEDGE QVITSPHVHP ATDVPFAAAE KIKKYIRTQT SPTATIVFRG TVVGSTPPSP
501: RMASFSSRGP NFRAPEILKP DVTAPGVDIL AAWTGANSPS ELDFDTRRVK YNIISGTSMS CPHVSGIVAL LRQARPEWSP ATIKSALMTT ASNMDSAGGV
601: IGDMSTGEAS TPFTRGAGHI DPNSAVDPGL VYDAGTEDYI TFLCALGYTA KQIAVFGSSS SCSTRAGSSV GDHNYPAFSV VFTSNKKKAV VTQRRVVRNV
701: GSDATTTYRA KITAPDGVLV TVSPETLRFS ATQKTQGYVV TFAREIGGSV TEKYTFGSIE WSDGEHTVTS PIAVTWPTNQ VEEM

Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)

001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF

Arabidopsis Description

SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.