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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52259 Canola extracellular, plasma membrane, vacuole 98.13 64.13
Bra027376.1-P Field mustard extracellular, plasma membrane, vacuole 98.96 61.34
CDY33251 Canola plasma membrane 94.18 58.45
AT3G14067.1 Thale cress plasma membrane 93.97 58.17
CDY39093 Canola plasma membrane 93.35 57.94
HORVU5Hr1G027960.1 Barley plastid 48.23 51.79
CDY43568 Canola plastid 22.04 49.3
CDX75757 Canola cytosol, plastid 40.75 48.64
CDX80285 Canola cytosol, plastid 41.16 47.48
CDY66924 Canola cytosol 54.05 46.35
Solyc06g062950.1.1 Tomato extracellular 68.81 42.65
PGSC0003DMT400012537 Potato extracellular 68.61 42.53
VIT_09s0002g01040.t01 Wine grape extracellular 67.36 42.02
PGSC0003DMT400088012 Potato extracellular 66.53 41.72
KRH47618 Soybean extracellular 66.32 41.16
EES07632 Sorghum extracellular 65.07 39.77
Zm00001d018282_P001 Maize extracellular 64.24 39.46
VIT_09s0002g01030.t01 Wine grape endoplasmic reticulum, extracellular, golgi 64.03 39.09
Os02t0779200-01 Rice extracellular 62.99 38.75
TraesCS6B01G370300.1 Wheat golgi 62.37 38.46
TraesCS6A01G339400.1 Wheat extracellular, golgi 62.58 38.44
TraesCS6D01G318700.1 Wheat cytosol 53.01 38.29
TraesCS6D01G319700.1 Wheat golgi 62.37 38.07
HORVU6Hr1G081850.2 Barley cytosol, plastid 62.58 38.05
GSMUA_Achr6P03640_001 Banana plastid 49.69 38.0
CDY65695 Canola plastid 42.41 37.71
EES07654 Sorghum plastid 45.95 35.3
CDY18042 Canola extracellular, plasma membrane 53.85 35.14
Zm00001d052104_P001 Maize extracellular 56.13 34.62
EES05894 Sorghum extracellular 55.93 34.49
TraesCS6B01G368600.1 Wheat extracellular 55.93 34.27
CDY33400 Canola extracellular, plasma membrane 53.43 34.22
CDY12840 Canola extracellular 54.05 34.21
CDY44380 Canola extracellular 48.86 34.16
CDY22001 Canola extracellular, plasma membrane 51.98 34.06
CDY57437 Canola extracellular 53.64 33.95
CDY18654 Canola extracellular, plasma membrane 52.39 33.83
TraesCS6B01G369400.1 Wheat extracellular 54.47 33.63
CDY63219 Canola extracellular 51.77 33.51
CDY29697 Canola extracellular 51.98 33.47
TraesCS6A01G339100.1 Wheat extracellular, unclear 54.26 33.46
CDY63302 Canola extracellular, vacuole 51.98 33.42
CDY67452 Canola extracellular, plasma membrane 51.77 33.29
TraesCS6A01G337900.1 Wheat extracellular 51.35 33.29
TraesCS6A01G036800.1 Wheat extracellular 53.85 32.91
TraesCS5D01G322200.1 Wheat extracellular 53.22 32.65
HORVU6Hr1G081640.1 Barley endoplasmic reticulum, extracellular, vacuole 53.22 32.61
TraesCS5A01G316000.1 Wheat extracellular 53.22 32.61
HORVU6Hr1G081710.1 Barley extracellular 53.01 32.57
TraesCS6D01G319800.1 Wheat unclear 53.01 32.53
TraesCS6A01G337800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 53.01 32.44
CDY63300 Canola extracellular 48.23 32.4
CDY18653 Canola extracellular, plasma membrane 48.23 32.36
Zm00001d018281_P001 Maize plasma membrane 52.81 32.27
TraesCS6A01G339200.1 Wheat extracellular, unclear 52.6 32.27
CDY18651 Canola extracellular, plasma membrane 50.31 32.22
TraesCS6B01G370100.1 Wheat extracellular 52.18 32.02
TraesCS6B01G368500.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.18 31.93
HORVU6Hr1G081750.1 Barley extracellular, plasma membrane 54.47 31.64
TraesCS7B01G452500.1 Wheat extracellular 51.35 31.63
TraesCS6D01G319900.2 Wheat golgi, unclear 54.68 31.53
TraesCS6B01G370000.1 Wheat peroxisome, plastid, vacuole 54.26 31.48
TraesCS6B01G051400.1 Wheat extracellular 51.56 31.43
CDY55359 Canola extracellular, vacuole 45.95 31.39
HORVU6Hr1G081730.1 Barley plastid 53.43 31.19
CDX97560 Canola extracellular 49.9 31.17
CDX82491 Canola extracellular 49.69 31.16
CDX98438 Canola extracellular 49.69 31.04
HORVU6Hr1G018160.1 Barley extracellular, mitochondrion, plasma membrane 52.6 30.93
CDX72509 Canola extracellular, plasma membrane 47.61 30.25
CDY40653 Canola extracellular, vacuole 47.82 29.99
CDY00497 Canola extracellular, plasma membrane 48.23 29.94
CDX99895 Canola extracellular, plasma membrane 47.82 29.68
Os02t0780200-01 Rice extracellular 47.82 29.11
CDX90065 Canola extracellular, plasma membrane 44.7 28.51
CDY15145 Canola extracellular, plasma membrane 45.32 28.39
CDY65487 Canola extracellular, vacuole 44.28 27.48
CDY15084 Canola extracellular, vacuole 43.66 27.1
CDY65693 Canola extracellular, golgi 42.41 26.74
CDY40408 Canola extracellular 41.16 25.78
CDY37334 Canola extracellular 41.16 25.75
Os02t0779000-00 Rice extracellular 34.1 25.51
CDY23110 Canola extracellular 40.12 24.87
CDY13044 Canola extracellular 39.92 24.74
KRH06199 Soybean endoplasmic reticulum, nucleus 66.11 22.28
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1GO:A0A078E9Z9EnsemblPlants:CDX97539
ProteinID:CDX97539ProteinID:CDX97539.1GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00104750001InterPro:IPR036852
InterPro:PA_domainPFAM:PF00082PFAM:PF02225ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF331
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASSUPFAM:SSF52025SUPFAM:SSF52743UniParc:UPI0004EEFD4F
SEG:seg:::::
Description
BnaA05g25400D
Coordinates
chrLK031900:-:206355..207800
Molecular Weight (calculated)
50116.3 Da
IEP (calculated)
5.128
GRAVY (calculated)
0.035
Length
481 amino acids
Sequence
(BLAST)
001: MDSIAIGAFG ATRHGIVVSC SAGNSGPGPQ TATNIAPWIL TVGASTIDRE FSANAITGDG KVFTGTSLYA GEPLPDSQLS LVYSGDCGSR LCYPGKLNAS
101: LVEGKIVLCD RGGNARVEKG SAVKIAGGAG MILANTAESG EELTADSHLV PATMVGAKAG DQIREYIQKS DSPTATISFL GTLIGPSPPS PRVAAFSSRG
201: PNHITPVILK PDVIAPGVNI LAGWTGMVGP TDLDIDPRRV QFNIISGTSM SCPHVSGLAA LLRKAHPDWS PAAIKSALVT TAYDTENSGE PIEDLATGKS
301: SNSFIHGAGH VDPNKALNPG LVYDIDVKDY VAFLCAVGYE FPGILVFLQD PTLYNACETS KLRTAGDLNY PSFSVVFGST VDVVKYRRVV KNVGTNVDAV
401: YEVGVKSPAN VEIDVSPRKL AFSKGEGELE YEVTFRSVVL GGGVGSVPGH EFGSIEWTDG EHVVKSPVAV QWGQGSSVQS F
Best Arabidopsis Sequence Match ( AT3G14067.1 )
(BLAST)
001: MAKLSLSSIF FVFPLLLCFF SPSSSSSDGL ESYIVHVQRS HKPSLFSSHN NWHVSLLRSL PSSPQPATLL YSYSRAVHGF SARLSPIQTA ALRRHPSVIS
101: VIPDQAREIH TTHTPAFLGF SQNSGLWSNS NYGEDVIVGV LDTGIWPEHP SFSDSGLGPI PSTWKGECEI GPDFPASSCN RKLIGARAFY RGYLTQRNGT
201: KKHAAKESRS PRDTEGHGTH TASTAAGSVV ANASLYQYAR GTATGMASKA RIAAYKICWT GGCYDSDILA AMDQAVADGV HVISLSVGAS GSAPEYHTDS
301: IAIGAFGATR HGIVVSCSAG NSGPNPETAT NIAPWILTVG ASTVDREFAA NAITGDGKVF TGTSLYAGES LPDSQLSLVY SGDCGSRLCY PGKLNSSLVE
401: GKIVLCDRGG NARVEKGSAV KLAGGAGMIL ANTAESGEEL TADSHLVPAT MVGAKAGDQI RDYIKTSDSP TAKISFLGTL IGPSPPSPRV AAFSSRGPNH
501: LTPVILKPDV IAPGVNILAG WTGMVGPTDL DIDPRRVQFN IISGTSMSCP HVSGLAALLR KAHPDWSPAA IKSALVTTAY DVENSGEPIE DLATGKSSNS
601: FIHGAGHVDP NKALNPGLVY DIEVKEYVAF LCAVGYEFPG ILVFLQDPTL YDACETSKLR TAGDLNYPSF SVVFASTGEV VKYKRVVKNV GSNVDAVYEV
701: GVKSPANVEI DVSPSKLAFS KEKSVLEYEV TFKSVVLGGG VGSVPGHEFG SIEWTDGEHV VKSPVAVQWG QGSVQSF
Arabidopsis Description
SBT1.4Subtilisin-like protease SBT1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVJ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.