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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43568 Canola plastid 35.65 93.02
CDX80285 Canola cytosol, plastid 50.62 68.11
Bra036803.1-P Field mustard extracellular 64.17 64.63
CDY44380 Canola extracellular 76.83 62.65
AT5G67360.1 Thale cress extracellular, plasma membrane 78.07 57.86
CDY12840 Canola extracellular 76.65 56.58
CDY57437 Canola extracellular 76.29 56.32
CDX97539 Canola plastid 46.35 54.05
CDY29697 Canola extracellular 71.84 53.95
CDY18654 Canola extracellular, plasma membrane 71.48 53.83
CDY63300 Canola extracellular 67.91 53.21
CDY18653 Canola extracellular, plasma membrane 67.74 53.0
CDY22001 Canola extracellular, plasma membrane 69.34 53.0
CDY63219 Canola extracellular 68.63 51.82
CDY67452 Canola extracellular, plasma membrane 68.98 51.74
CDY63302 Canola extracellular, vacuole 68.27 51.2
CDY18651 Canola extracellular, plasma membrane 68.45 51.13
CDY55359 Canola extracellular, vacuole 63.46 50.57
PGSC0003DMT400038500 Potato cytosol 63.1 48.56
PGSC0003DMT400064274 Potato extracellular 64.53 48.07
CDX75757 Canola cytosol, plastid 34.22 47.64
Solyc02g092670.1.1 Tomato extracellular 63.81 47.48
VIT_07s0129g00490.t01 Wine grape extracellular 63.81 46.68
Solyc02g092680.1.1 Tomato extracellular 61.32 45.68
Solyc03g044150.2.1 Tomato extracellular 62.75 45.66
GSMUA_Achr9P09530_001 Banana extracellular, vacuole 60.43 44.78
GSMUA_Achr6P34760_001 Banana extracellular 46.88 43.11
Os03t0605300-01 Rice extracellular 58.47 42.88
Zm00001d033194_P001 Maize extracellular 58.29 42.8
TraesCS4A01G237500.1 Wheat unclear 58.47 42.76
TraesCS4B01G077600.1 Wheat extracellular 58.11 42.5
TraesCS4D01G076000.1 Wheat extracellular 57.75 42.41
HORVU4Hr1G013170.1 Barley extracellular 58.29 42.36
GSMUA_Achr6P11180_001 Banana plastid 36.9 42.16
KXG38048 Sorghum extracellular 57.93 41.99
Os03t0761500-01 Rice extracellular, vacuole 56.51 41.49
EER90842 Sorghum extracellular, plasma membrane 55.97 41.1
Zm00001d034112_P001 Maize endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 55.62 40.78
KRH28401 Soybean extracellular 55.44 40.39
CDY65695 Canola plastid 38.86 40.3
HORVU5Hr1G097150.1 Barley extracellular, vacuole 54.72 40.18
TraesCS5B01G404600.1 Wheat golgi 54.37 39.92
TraesCS5A01G399800.1 Wheat golgi 54.19 39.74
TraesCS5D01G409600.1 Wheat unclear 54.01 39.66
KRH76515 Soybean extracellular 54.37 39.35
CDY18042 Canola extracellular, plasma membrane 51.16 38.94
CDY33400 Canola extracellular, plasma membrane 50.98 38.08
CDY52259 Canola extracellular, plasma membrane, vacuole 48.48 36.96
CDY39093 Canola plasma membrane 49.55 35.87
CDY33251 Canola plasma membrane 49.55 35.87
PGSC0003DMT400064275 Potato cytosol 27.09 35.85
CDY00497 Canola extracellular, plasma membrane 48.31 34.97
CDX99895 Canola extracellular, plasma membrane 47.77 34.58
CDX72509 Canola extracellular, plasma membrane 45.99 34.08
CDY40653 Canola extracellular, vacuole 46.17 33.77
CDX82491 Canola extracellular 45.99 33.64
CDX97560 Canola extracellular 46.17 33.64
CDX98438 Canola extracellular 45.99 33.51
CDY15145 Canola extracellular, plasma membrane 44.38 32.42
CDX90065 Canola extracellular, plasma membrane 43.49 32.36
CDY65487 Canola extracellular, vacuole 42.96 31.1
CDY15084 Canola extracellular, vacuole 42.78 30.97
CDY65693 Canola extracellular, golgi 40.46 29.75
CDY37334 Canola extracellular 40.11 29.26
CDY40408 Canola extracellular 39.57 28.91
CDY23110 Canola extracellular 38.86 28.09
CDY13044 Canola extracellular 38.86 28.09
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30GO:A0A078JJL1UniProt:A0A078JJL1
EnsemblPlants:CDY66924ProteinID:CDY66924ProteinID:CDY66924.1GO:GO:0003674GO:GO:0003824GO:GO:0004252
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00057643001
InterPro:IPR036852InterPro:PA_domainPFAM:PF00082PFAM:PF02225ScanProsite:PS00138PANTHER:PTHR10795
PANTHER:PTHR10795:SF469InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASSUPFAM:SSF52025SUPFAM:SSF52743
UniParc:UPI0004EF2EDFSEG:seg::::
Description
BnaAnng23240DBnaAnng23240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJL1]
Coordinates
chrLK035584:+:4808..6612
Molecular Weight (calculated)
59145.0 Da
IEP (calculated)
8.030
GRAVY (calculated)
0.137
Length
561 amino acids
Sequence
(BLAST)
001: MKSIRDVDNI QYLIPARVAV YKVCWEGGCF SSDILAAIDK AIDDNVNILS MSLGGGTVAI GAFAAMERGI LVSCSAGNSG PSSSTLSNVA PWITTVGAGT
101: IDRDFPAVAV FGNGKNYSGV SLFKGDALPD KTLPFVYAGN ASNAANGNLC GPGTLIPEKV KGKIVMCDRG VNARVQKGEV VKAAGGLGMI LANTAENGEE
201: LVADAHLLPA TAVGEKAGDI IRHYVLTDPN PTASVLIRGT VVNVQPSPVV AAFSSRGPNS ITPDILKPDL IAPGVNILAG WTGSKGPTGL ASDARRVEFN
301: IISGTSMSCP HVSGLAALLK SVHPEWIPAA IRLALMTTAY KTYNDGKPIL DVTMGKPSTL FEHGAGHVSP TTAINPGLIY DLTTVDYLGF LCALNYTPSQ
401: ITSVSRRNYT CDPSKSYSVA DLNYPLFAVN IDGSGVFKYT RTVTSVGGAG SYSVKVNSET TDVEILVEPA VLNFKEVNEK KSYTVMFTVN SSKASRSNRF
501: GSIEWSDGKH VVASPIAISW TYALLCNSSL FQSKNGMQCV IGLYLFSLCY LKKVNILWPQ G
Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)
001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF
Arabidopsis Description
SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.