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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43568 Canola plastid 34.53 66.98
CDY66924 Canola cytosol 68.11 50.62
CDY18654 Canola extracellular, plasma membrane 73.86 41.34
CDX97539 Canola plastid 47.48 41.16
CDY18651 Canola extracellular, plasma membrane 73.86 41.01
CDY67452 Canola extracellular, plasma membrane 72.66 40.51
CDX75757 Canola cytosol, plastid 38.85 40.2
CDY18653 Canola extracellular, plasma membrane 67.87 39.47
AT5G67360.1 Thale cress extracellular, plasma membrane 70.26 38.71
CDY22001 Canola extracellular, plasma membrane 68.11 38.69
CDY63300 Canola extracellular 66.19 38.55
CDY44380 Canola extracellular 63.55 38.52
CDY63219 Canola extracellular 68.11 38.22
CDY63302 Canola extracellular, vacuole 68.11 37.97
CDY12840 Canola extracellular 69.06 37.89
CDY57437 Canola extracellular 68.82 37.76
CDY55359 Canola extracellular, vacuole 63.55 37.64
CDY29697 Canola extracellular 67.39 37.62
PGSC0003DMT400038500 Potato cytosol 56.83 32.51
PGSC0003DMT400064274 Potato extracellular 58.03 32.14
Solyc02g092670.1.1 Tomato extracellular 57.55 31.83
Solyc02g092680.1.1 Tomato extracellular 56.35 31.21
CDY65695 Canola plastid 40.05 30.87
VIT_07s0129g00490.t01 Wine grape extracellular 56.59 30.77
GSMUA_Achr9P09530_001 Banana extracellular, vacuole 55.16 30.38
Solyc03g044150.2.1 Tomato extracellular 56.12 30.35
Os03t0605300-01 Rice extracellular 55.4 30.2
KXG38048 Sorghum extracellular 55.64 29.97
Os03t0761500-01 Rice extracellular, vacuole 54.92 29.97
GSMUA_Achr6P11180_001 Banana plastid 35.01 29.74
HORVU5Hr1G097150.1 Barley extracellular, vacuole 54.44 29.71
EER90842 Sorghum extracellular, plasma membrane 54.2 29.58
TraesCS5B01G404600.1 Wheat golgi 54.2 29.58
TraesCS5D01G409600.1 Wheat unclear 53.96 29.45
TraesCS5A01G399800.1 Wheat golgi 53.96 29.41
Zm00001d033194_P001 Maize extracellular 53.72 29.32
Zm00001d034112_P001 Maize endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 53.72 29.28
TraesCS4B01G077600.1 Wheat extracellular 53.0 28.81
TraesCS4A01G237500.1 Wheat unclear 53.0 28.81
HORVU4Hr1G013170.1 Barley extracellular 53.24 28.76
TraesCS4D01G076000.1 Wheat extracellular 52.52 28.66
KRH28401 Soybean extracellular 52.76 28.57
KRH76515 Soybean extracellular 53.0 28.52
GSMUA_Achr6P34760_001 Banana extracellular 41.49 28.36
CDY18042 Canola extracellular, plasma membrane 49.64 28.09
CDY33400 Canola extracellular, plasma membrane 49.88 27.7
CDY52259 Canola extracellular, plasma membrane, vacuole 47.24 26.77
CDY39093 Canola plasma membrane 47.48 25.55
CDY33251 Canola plasma membrane 47.24 25.42
CDY00497 Canola extracellular, plasma membrane 46.76 25.16
CDX72509 Canola extracellular, plasma membrane 45.56 25.1
CDX82491 Canola extracellular 45.8 24.9
CDX97560 Canola extracellular 45.8 24.81
CDX99895 Canola extracellular, plasma membrane 46.04 24.77
CDY40653 Canola extracellular, vacuole 45.56 24.77
CDX98438 Canola extracellular 45.56 24.68
CDY15145 Canola extracellular, plasma membrane 43.41 23.57
CDX90065 Canola extracellular, plasma membrane 41.73 23.08
CDY15084 Canola extracellular, vacuole 41.01 22.06
CDY65487 Canola extracellular, vacuole 41.01 22.06
CDY65693 Canola extracellular, golgi 40.05 21.89
CDY37334 Canola extracellular 39.33 21.33
CDY40408 Canola extracellular 38.61 20.96
CDY23110 Canola extracellular 37.89 20.36
CDY13044 Canola extracellular 37.89 20.36
PGSC0003DMT400064275 Potato cytosol 15.35 15.09
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1GO:A0A078CTU6EnsemblPlants:CDX80285
ProteinID:CDX80285ProteinID:CDX80285.1GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00133284001InterPro:IPR036852
PFAM:PF00082ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF469InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-ASSUPFAM:SSF52743UniParc:UPI0004EE7CC1:::
Description
BnaC09g34570D
Coordinates
chrLK031820:-:1207949..1209285
Molecular Weight (calculated)
44656.3 Da
IEP (calculated)
7.667
GRAVY (calculated)
-0.010
Length
417 amino acids
Sequence
(BLAST)
001: MERGIFVSCF AGNSSPSPFS LRNEAPWITT VGAGTIDRDF PALALLSATE RTILELPCLK ERLFQLSCCR LFTRKRLEGG NDNVEKGEVV KAAGGLGMII
101: ANVPDYGEEL RGYAFKLPAT TVGRKASDII CHYVMTDPNP TASIVIQGTA VNVQPSPVLA AFSSLGPNSI TPNILKPDLI APGVNILAAW TGAVGPSGLA
201: SDTRRVEFNI ISGTSMSCPH VSGLAALLKS VHPKWSPAAI RSALMTTAYN TYSDRQPLLD IATVEPSTPF GHGAGHVSPT TVISPGLIYD LTTQDYIDFL
301: CALNYKSSQI TKVSRGSYAC DSNKTYSVAD LNYLSFAVNV EGSDTYKYTR TVTSVGGAGS YSVKVISETT AVKISVEPPV LTFKEVNEKK SYSDKLHSFN
401: HLCIRTSCSP MPFGDEK
Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)
001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF
Arabidopsis Description
SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.