Factsheet for TraesCS5D01G409600.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G404600.1	Wheat	golgi	98.43	98.43
TraesCS5A01G399800.1	Wheat	golgi	98.17	98.04
HORVU5Hr1G097150.1	Barley	extracellular, vacuole	95.68	95.68
Os03t0761500-01	Rice	extracellular, vacuole	83.9	83.9
EER90842	Sorghum	extracellular, plasma membrane	82.33	82.33
Zm00001d034112_P001	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	81.68	81.57
GSMUA_Achr6P11180_001	Banana	plastid	44.76	69.65
GSMUA_Achr9P09530_001	Banana	extracellular, vacuole	67.41	68.03
GSMUA_Achr6P34760_001	Banana	extracellular	53.93	67.54
TraesCS4D01G076000.1	Wheat	extracellular	67.15	67.15
PGSC0003DMT400064275	Potato	cytosol	36.65	66.04
PGSC0003DMT400064274	Potato	extracellular	63.22	64.14
Solyc02g092670.1.1	Tomato	extracellular	63.09	63.93
PGSC0003DMT400038500	Potato	cytosol	60.86	63.79
KRH04480	Soybean	endoplasmic reticulum	62.83	63.16
KRH58046	Soybean	extracellular, vacuole	62.3	63.05
AT5G67360.1	Thale cress	extracellular, plasma membrane	62.04	62.62
CDY12840	Canola	extracellular	61.78	62.11
Bra012157.1-P	Field mustard	extracellular	61.13	61.45
CDY57437	Canola	extracellular	61.13	61.45
VIT_07s0129g00490.t01	Wine grape	extracellular	61.65	61.41
Solyc03g044150.2.1	Tomato	extracellular	61.13	60.57
PGSC0003DMT400055410	Potato	extracellular	60.08	59.92
Bra037113.1-P	Field mustard	cytosol	56.54	59.83
VIT_18s0001g09360.t01	Wine grape	extracellular	59.82	59.74
Solyc04g078110.1.1	Tomato	extracellular	59.82	59.66
Solyc02g092680.1.1	Tomato	extracellular	58.64	59.5
Bra037112.1-P	Field mustard	extracellular, plasma membrane	58.77	59.23
CDY55359	Canola	extracellular, vacuole	54.58	59.23
Bra021614.1-P	Field mustard	extracellular	58.51	59.05
CDY18654	Canola	extracellular, plasma membrane	57.46	58.93
CDY29697	Canola	extracellular	57.46	58.77
CDY67452	Canola	extracellular, plasma membrane	57.2	58.42
CDY18651	Canola	extracellular, plasma membrane	57.07	58.06
Bra037115.1-P	Field mustard	extracellular, plasma membrane	57.98	57.83
CDY18653	Canola	extracellular, plasma membrane	54.19	57.74
CDY63300	Canola	extracellular	54.06	57.68
KRH52072	Soybean	nucleus	57.85	57.48
KRH61386	Soybean	nucleus	57.46	57.01
CDY44380	Canola	extracellular	50.92	56.54
Bra033113.1-P	Field mustard	extracellular	50.52	56.35
KRH15432	Soybean	nucleus	56.68	55.94
KRH28401	Soybean	extracellular	56.28	55.84
KRH05609	Soybean	extracellular, vacuole	56.68	55.73
CDY22001	Canola	extracellular, plasma membrane	53.53	55.72
Bra039051.1-P	Field mustard	extracellular, plasma membrane	53.27	55.45
CDY63219	Canola	extracellular	53.8	55.32
CDY63302	Canola	extracellular, vacuole	54.06	55.21
Bra036803.1-P	Field mustard	extracellular	39.66	54.4
CDY66924	Canola	cytosol	39.66	54.01
CDX80285	Canola	cytosol, plastid	29.45	53.96
KRH76515	Soybean	extracellular	53.93	53.16
TraesCS2D01G396400.1	Wheat	golgi	53.93	53.02
TraesCS7D01G213300.1	Wheat	vacuole	53.01	52.73
CDY43568	Canola	plastid	14.66	52.09
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.96	51.42
TraesCS6D01G318700.1	Wheat	cytosol	43.32	49.7
TraesCS3D01G416100.1	Wheat	extracellular	50.65	49.68
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	50.39	49.04
TraesCS6D01G319700.1	Wheat	golgi	47.91	46.45
TraesCS4D01G305500.1	Wheat	extracellular	46.73	44.79
TraesCS5D01G322200.1	Wheat	extracellular	45.42	44.26
TraesCS6D01G319800.1	Wheat	unclear	45.29	44.13
TraesCS6D01G319900.2	Wheat	golgi, unclear	46.34	42.45
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	43.06	42.29
TraesCS5D01G264000.1	Wheat	nucleus	43.06	40.57
TraesCS5D01G033200.1	Wheat	cytosol	39.53	40.37
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	39.66	39.97
TraesCS2D01G036400.1	Wheat	plasma membrane	40.31	39.64
TraesCS3D01G255800.1	Wheat	vacuole	38.87	39.55
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	40.58	38.37
TraesCS2D01G036500.1	Wheat	plasma membrane	39.14	37.33

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF516	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G409600	EnsemblPlants:TraesCS5D01G409600.1
TIGR:cd02120	TIGR:cd04852	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:473115446..473117740

Molecular Weight (calculated)

78615.5 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.006

Length

764 amino acids

Sequence
(BLAST)

001: MRCHGRRSAL FAVAVVAAIV AAAAAAEVVH DGRRTYIVHC SHAAMPSEFA AHGDWYASSL QSVSGGAAEV IYTYDTLLHG YSARLTRAEA RALEAQPGVL
101: LVNPETRYEL HTTRTPEFLG LDRAEALFPE SNTASDVIVG VLDTGVWPER PSYDDAGFGP VPAGWKGKCE GGSDFNSSAC NRKLIGARYF LAGYEASKGP
201: VDTTKESRSP RDNDGHGTHT SSTAAGSAVR GADLLGYASG TAKGMAPRAR VATYKVCWVG GCFSSDILKG MEVAVADGVD VLSLSLGGGT SDYYRDSIAV
301: GAYSAMERGI FVSCSAGNAG PGAASLTNGA PWITTVGAGT LDRDFPAYVT LGDGNKYNGV SLYNGKQLPT TPVPFIYAGN ASNSSMGALC MTGTLIPAKV
401: AGKIVLCDRG TNARVQKGFV VRDAGGAGMV LANTAANGEE LVADAHILPG AGVGEKAGNA MRTYASSDPK PTANIVFAGT KVGIQPSPVV AAFSSRGPNT
501: VTPGILKPDL IAPGVNILAA WSGSVGPSGI AGDDRRTSFN IISGTSMSCP HVSGLAALLR AAHQDWSPAA IRSALMTTAY AAYPNGDGLL DVATERAATP
601: LDMGAGHVDP SKAVDPGLVY DLTAADYLDF LCAIEYEPAQ IAALTKHSSD HCSPNRTYSV AALNYPSFSA TFPAAGGTEK HTRTLTNVGK PGTYKVTAAA
701: AAGGTAIKVS VEPSTLSFSK VGEKRSYTVS FAAGGKPSGT NGFGRLVWSS DHHVVASAIL ATWA

Best Arabidopsis Sequence Match ( AT5G67360.1 )
(BLAST)

001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT

Arabidopsis Description

SBT1.7Subtilisin-like protease SBT1.7 [Source:UniProtKB/Swiss-Prot;Acc:O65351]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.