Factsheet for TraesCS4D01G305500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G307400.1	Wheat	extracellular	96.49	96.73
TraesCS4A01G407900.1	Wheat	extracellular	94.48	94.72
OQU93252	Sorghum	extracellular	77.67	78.45
Zm00001d027627_P001	Maize	extracellular	77.54	77.93
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	58.59	60.65
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	58.22	60.57
Solyc06g083720.1.1	Tomato	nucleus	55.08	56.94
TraesCS4D01G076000.1	Wheat	extracellular	46.93	48.95
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	47.43	48.15
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.29	46.76
TraesCS5D01G409600.1	Wheat	unclear	44.79	46.73
TraesCS3D01G416100.1	Wheat	extracellular	44.92	45.96
TraesCS6D01G318700.1	Wheat	cytosol	37.64	45.05
TraesCS7D01G213300.1	Wheat	vacuole	42.79	44.4
TraesCS2D01G396400.1	Wheat	golgi	42.03	43.11
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	41.03	42.03
TraesCS6D01G319700.1	Wheat	golgi	41.03	41.5
TraesCS5D01G322200.1	Wheat	extracellular	40.65	41.33
TraesCS5D01G033200.1	Wheat	cytosol	38.64	41.18
TraesCS5D01G264000.1	Wheat	nucleus	41.66	40.94
TraesCS6D01G319800.1	Wheat	unclear	40.15	40.82
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	40.78	40.22
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	37.77	39.71
TraesCS6D01G319900.2	Wheat	golgi, unclear	40.4	38.61
TraesCS3D01G255800.1	Wheat	vacuole	36.14	38.35
TraesCS2D01G036400.1	Wheat	plasma membrane	36.39	37.32
TraesCS2D01G036500.1	Wheat	plasma membrane	37.26	37.08

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF350	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G305500	EnsemblPlants:TraesCS4D01G305500.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:473855055..473857448

Molecular Weight (calculated)

83906.3 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.078

Length

797 amino acids

Sequence
(BLAST)

001: MGFLHLFASH VAFFSLFLSS LVFLHGAAAD QAEALRTYIV QLHPRGSTGG GDATSSDHDW HLAFLIKSVP SSVEQDDKRQ RKPSSRLLYS YHTVFDGFAA
101: RLTVGEAAAL RALQGVASVR EDRRVELHTT YSYRFLGLNV CPTGAWARAR YGRGVVVGVL DTGVWPESPS FDDRGMPPVP DRWRGVCETG ERFNATNCNR
201: KLVGARFYSK GHRANYPTDP SDAAARAREY ASPRDAHGHG THTASTAAGS AVAGASVLGA GAGEARGVSP GAHVAAYKVC WFNGCFSSDI LAGMDDAVRD
301: GVDVLSLSLG GFPIPLFEDS IAIGSFRATV RGVSVVSAAG NNGPEPSSVA NEAPWMLTVG AATLDRRFPA YVRLGNGRVL YGESMYPGKI DLKNGGKKAL
401: ELFYAAGGSR EAMYCMKGSL SAAEVAGKMV VCDRGITGRA DKGQAVKEAG GAAMVLANSE INRQEDSVDV HVLPATLVGY QEAVELKNYI SSTPRPVARI
501: AFGGTRIGLA RAPAVALFSA RGPSVTSPSV LKPDVIAPGV NIIAAWPGSV GPSGLDGDAR RSNFTVLSGT SMACPHVSGI AALVRSAHPS WSPAMVRSAI
601: MTTADVTDRQ GKPITDGDGG DRADAFAMGA GHVNPALAVD PGLVYDIEPA DYVTHLCTLG YTQREVFKIT HSAVNCSELL HENPGFTLNY PSIAVAFKDG
701: GGETSAVLRR TVTNVGAPNS TYTARVAAPP GIKVTVAPTT LAFAEFGEKK SFQVRVDASA AAGKDSAEGY LVWKQQSAGQ GRRRTVRSPI AVTWPVE

Best Arabidopsis Sequence Match ( AT1G04110.1 )
(BLAST)

001: MEPKPFFLCI IFLLFCSSSS EILQKQTYIV QLHPNSETAK TFASKFDWHL SFLQEAVLGV EEEEEEPSSR LLYSYGSAIE GFAAQLTESE AEILRYSPEV
101: VAVRPDHVLQ VQTTYSYKFL GLDGFGNSGV WSKSRFGQGT IIGVLDTGVW PESPSFDDTG MPSIPRKWKG ICQEGESFSS SSCNRKLIGA RFFIRGHRVA
201: NSPEESPNMP REYISARDST GHGTHTASTV GGSSVSMANV LGNGAGVARG MAPGAHIAVY KVCWFNGCYS SDILAAIDVA IQDKVDVLSL SLGGFPIPLY
301: DDTIAIGTFR AMERGISVIC AAGNNGPIES SVANTAPWVS TIGAGTLDRR FPAVVRLANG KLLYGESLYP GKGIKNAGRE VEVIYVTGGD KGSEFCLRGS
401: LPREEIRGKM VICDRGVNGR SEKGEAVKEA GGVAMILANT EINQEEDSID VHLLPATLIG YTESVLLKAY VNATVKPKAR IIFGGTVIGR SRAPEVAQFS
501: ARGPSLANPS ILKPDMIAPG VNIIAAWPQN LGPTGLPYDS RRVNFTVMSG TSMSCPHVSG ITALIRSAYP NWSPAAIKSA LMTTADLYDR QGKAIKDGNK
601: PAGVFAIGAG HVNPQKAINP GLVYNIQPVD YITYLCTLGF TRSDILAITH KNVSCNGILR KNPGFSLNYP SIAVIFKRGK TTEMITRRVT NVGSPNSIYS
701: VNVKAPEGIK VIVNPKRLVF KHVDQTLSYR VWFVLKKKNR GGKVASFAQG QLTWVNSHNL MQRVRSPISV TLKTN

Arabidopsis Description

SBT1.2SDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WPN6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.