CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027627_P001	Maize	extracellular	94.42	93.95
TraesCS4A01G407900.1	Wheat	extracellular	78.33	77.74
TraesCS4D01G305500.1	Wheat	extracellular	78.45	77.67
TraesCS4B01G307400.1	Wheat	extracellular	78.07	77.48
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	60.58	62.4
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	59.82	61.3
Solyc06g083720.1.1	Tomato	nucleus	56.78	58.11
KXG38048	Sorghum	extracellular	46.13	47.03
EER90842	Sorghum	extracellular, plasma membrane	45.5	46.99
EER92571	Sorghum	extracellular, plasma membrane	46.64	46.58
EER94293	Sorghum	extracellular	44.99	46.28
EER96794	Sorghum	extracellular, plasma membrane	45.12	45.99
EES07654	Sorghum	plastid	35.23	44.41
EES13951	Sorghum	extracellular	44.61	43.73
EES07632	Sorghum	extracellular	42.84	42.95
EES12694	Sorghum	extracellular, golgi, plasma membrane	42.08	42.73
EES05894	Sorghum	extracellular	42.21	42.69
KXG35865	Sorghum	extracellular, mitochondrion	43.6	42.16
EER90461	Sorghum	extracellular, golgi	41.06	40.86
EER88633	Sorghum	cytosol, extracellular, mitochondrion, plasma membrane	40.56	40.0
KXG33202	Sorghum	extracellular, plasma membrane, vacuole	40.3	39.41
KXG33299	Sorghum	plastid	39.16	37.36
OQU84580	Sorghum	mitochondrion	40.68	36.07

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	UniProt:A0A1Z5SBF2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006508	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0009653	GO:GO:0009791	GO:GO:0009897	GO:GO:0009987	GO:GO:0010103	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0042127	InterPro:IPR036852	InterPro:IPR037045	EnsemblPlants:OQU93252
ProteinID:OQU93252	ProteinID:OQU93252.1	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922
PRINTS:PR00723	ScanProsite:PS00136	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF350	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Asp-AS	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	EnsemblPlantsGene:SORBI_3001G507800	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B42609B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:77548831..77551565

Molecular Weight (calculated)

82896.9 Da

IEP (calculated)

8.671

GRAVY (calculated)

0.041

Length

789 amino acids

Sequence
(BLAST)

001: MDVARVLLVC HSLFLLLLLP AAVLGAAAET MQTYIVQLHP HDEGGSSEAV LSASKSKVDW HLSFLERSVA WEQEKRPSSR LLYSYHTVFD GFAAQLADGE
101: AAALRALPGV ASVRADRRVE LHTTYSYRFL GLNFCPTGAW ARSGYGRGTI IGVLDTGVWP ENPSFDDRGM PPAPVRWAGV CQGGEHFNAS NCNRKLIGAR
201: FYSKGHRANY PTNPSEAASL LEYVSPRDAH GHGTHTASTA AGAAVAGASV LGAGLGEARG VAPGAHVAAY KVCWFNGCYS SDILAGMDDA VRDGVDVLSL
301: SLGGFPIPLF EDSIAIGSFR ATARGVSVVC AAGNNGPARS SVANEAPWVL TVGAATLDRR FPAYVRLGDG RVLYGESMYP GEIGLKKGGK ELELVYAVGG
401: TRESEYCLKG SLDKAAVAGK MVVCDRGITG RADKGEAVKE AGGAAMVLAN SEINRQEDSI DVHVLPATLI GYREAVELKR YIRSTPRPVA RIVFGGTRIG
501: RARAPAVAVF SARGPSLTNP SVLKPDVVAP GVNIIAAWPG NLGPSGLESD ARRSNFTVLS GTSMAAPHVS GIAALIRSAH PSWSPAMVRS AIMTTADITD
601: RRGKAIVDGG DGGRAGVFAM GAGHVSPARA VDPGLVYDIQ PADYVIHLCT LGYTHMEIFK ITHTGVNCSA ALGGDRNRGV FSLNYPSIAV ALRNGARSAV
701: LLRTVTNVGT PNSTYAVQVS APPGVKVTVA PTTLSFVEFG EQRSFRVTVD APSPPAAKDS VEGYLVWKQS GGLGNHVVRS PIAVTWVVE

Best Arabidopsis Sequence Match ( AT1G04110.1 )
(BLAST)

001: MEPKPFFLCI IFLLFCSSSS EILQKQTYIV QLHPNSETAK TFASKFDWHL SFLQEAVLGV EEEEEEPSSR LLYSYGSAIE GFAAQLTESE AEILRYSPEV
101: VAVRPDHVLQ VQTTYSYKFL GLDGFGNSGV WSKSRFGQGT IIGVLDTGVW PESPSFDDTG MPSIPRKWKG ICQEGESFSS SSCNRKLIGA RFFIRGHRVA
201: NSPEESPNMP REYISARDST GHGTHTASTV GGSSVSMANV LGNGAGVARG MAPGAHIAVY KVCWFNGCYS SDILAAIDVA IQDKVDVLSL SLGGFPIPLY
301: DDTIAIGTFR AMERGISVIC AAGNNGPIES SVANTAPWVS TIGAGTLDRR FPAVVRLANG KLLYGESLYP GKGIKNAGRE VEVIYVTGGD KGSEFCLRGS
401: LPREEIRGKM VICDRGVNGR SEKGEAVKEA GGVAMILANT EINQEEDSID VHLLPATLIG YTESVLLKAY VNATVKPKAR IIFGGTVIGR SRAPEVAQFS
501: ARGPSLANPS ILKPDMIAPG VNIIAAWPQN LGPTGLPYDS RRVNFTVMSG TSMSCPHVSG ITALIRSAYP NWSPAAIKSA LMTTADLYDR QGKAIKDGNK
601: PAGVFAIGAG HVNPQKAINP GLVYNIQPVD YITYLCTLGF TRSDILAITH KNVSCNGILR KNPGFSLNYP SIAVIFKRGK TTEMITRRVT NVGSPNSIYS
701: VNVKAPEGIK VIVNPKRLVF KHVDQTLSYR VWFVLKKKNR GGKVASFAQG QLTWVNSHNL MQRVRSPISV TLKTN

Arabidopsis Description

SBT1.2SDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WPN6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.