CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046793_P001	Maize	extracellular, vacuole	82.5	84.08
TraesCS7A01G381400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	65.5	65.66
TraesCS7B01G283300.1	Wheat	extracellular, plasma membrane	65.0	65.16
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	65.62	64.98
HORVU7Hr1G090870.1	Barley	extracellular, plasma membrane, plastid	65.12	64.4
Os06t0609400-01	Rice	cytosol, extracellular	13.5	63.16
CDY15084	Canola	extracellular, vacuole	55.0	56.77
CDY65487	Canola	extracellular, vacuole	54.88	56.65
Bra013212.1-P	Field mustard	extracellular, vacuole	54.62	56.39
PGSC0003DMT400044595	Potato	extracellular, plasma membrane	36.62	55.92
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	53.62	55.86
Solyc07g056170.2.1	Tomato	nucleus	54.0	55.81
KRH58852	Soybean	nucleus	53.75	55.63
KRH42754	Soybean	extracellular, vacuole	53.38	55.24
AT2G04160.1	Thale cress	extracellular, vacuole	52.88	54.79
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	39.12	54.53
AT5G59810.1	Thale cress	mitochondrion	52.0	53.47
KXG35865	Sorghum	extracellular, mitochondrion	54.38	53.31
CDY65693	Canola	extracellular, golgi	50.38	52.82
Bra020285.1-P	Field mustard	extracellular, plasma membrane	50.12	52.56
KRH01924	Soybean	cytosol, nucleus	24.88	52.51
Bra014350.1-P	Field mustard	extracellular	50.38	52.47
KRH51225	Soybean	extracellular, plasma membrane	50.62	52.39
CDY40408	Canola	extracellular	50.25	52.34
CDY65695	Canola	plastid	35.38	52.31
CDY37334	Canola	extracellular	50.25	52.28
OQU84580	Sorghum	mitochondrion	56.88	51.12
Solyc12g011140.1.1	Tomato	nucleus	48.75	50.52
KRH03962	Soybean	extracellular, vacuole	47.5	49.22
KRH14773	Soybean	endoplasmic reticulum, extracellular, vacuole	47.12	48.15
KRH14771	Soybean	nucleus	46.5	47.51
KRH40182	Soybean	extracellular, vacuole	46.25	47.01
KXG33202	Sorghum	extracellular, plasma membrane, vacuole	46.5	46.1
EER90461	Sorghum	extracellular, golgi	45.38	45.78
KRH01039	Soybean	nucleus	46.0	45.71
KRH14769	Soybean	extracellular	44.38	45.11
EER90842	Sorghum	extracellular, plasma membrane	40.75	42.67
KXG38048	Sorghum	extracellular	40.5	41.86
KXG33299	Sorghum	plastid	42.5	41.11
EER96794	Sorghum	extracellular, plasma membrane	39.75	41.09
EES12694	Sorghum	extracellular, golgi, plasma membrane	39.88	41.06
EER94293	Sorghum	extracellular	39.25	40.94
OQU93252	Sorghum	extracellular	40.0	40.56
EES07632	Sorghum	extracellular	39.88	40.53
EER92571	Sorghum	extracellular, plasma membrane	39.25	39.75
EES07654	Sorghum	plastid	30.88	39.46
EES05894	Sorghum	extracellular	37.75	38.72
EES13951	Sorghum	extracellular	38.88	38.63

Protein Annotations

MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	EntrezGene:8082276
UniProt:C5Z5R2	EnsemblPlants:EER88633	ProteinID:EER88633	ProteinID:EER88633.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922
PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR43806	PANTHER:PTHR43806:SF22	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	EnsemblPlantsGene:SORBI_3010G188500
SUPFAM:SSF52025	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A89401	RefSeq:XP_002437266.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:52896453..52900041

Molecular Weight (calculated)

85321.1 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.105

Length

800 amino acids

Sequence
(BLAST)

001: METTSVSVSV ESTRRRRHTT TASTAAVLLV LLCCSLLQSP AAALASGSGN PSSYVVYLGG HPPRDDGVSP EVASRMAADS HYDLLGAVLG DREKAREAIF
101: YSYTKHINGF AANLEPRHAA EIARYPGVVS VFPNRGRKLH TTRTWEFMGL ERAGDVPQWS AWEKARYGED TIIGNLDSGV WPESKSFDDG EMGPIPDDWK
201: GICQNDHDRT FQCNSKLIGA RYFNKGWAEA SRLPLDDALN TPRDENGHGT HTLSTAGGAA VRGAGALGYG VGTARGGSPR ARVAAYRVCF RPVNGSECFD
301: ADVLSAFEAA IADGVHVISA SVGGDANDYL YDAVAIGSLH AVKAGIAVVC SASNNGPDLG TVTNVAPWIL TVAASSVDRE FSALAVFNHT RVEGMSLSER
401: WLHGEGFYPI IAGEEATAPG SKPKDAELCL MGSLDPEKVR GKIVVCLRGI AMRVLKGEAV RHAGGAAMIL VNDEASGDDI YPDPHVLPAV HISYANGLAL
501: WAYIKSTKVA TGFVVKGRTI LGMRPVPVMA AFSSQGPNTV NPEILKPDIT APGVNVIAAW SGATSPTERS FDKRRVAFNM LSGTSMSCPH VSGIAGLIKT
601: LHPDWSPSAI KSAIMTSATE LDVERKPIQN SSHAPATPFS YGAGHVFPSR ALDPGLVYDM TIVDYLDFLC ALGYNATAME DFNKGSFVCP STHMSLHDLN
701: YPSITAHGLR PGTTTMVRRR LKNVGPPGTY RVAVVREPEG VHVSVTPAML VFREAGEEKE FDVNFTVRDP APPAGYAFGA IVWSDGSHQV RSPLVVKTTQ

Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)

001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

Arabidopsis Description

AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.