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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043731_P001 Maize plastid 66.42 83.1
Os01t0702300-00 Rice extracellular 57.62 64.67
TraesCS3A01G254900.1 Wheat vacuole 59.36 62.45
HORVU3Hr1G065810.1 Barley plasma membrane 59.6 62.31
TraesCS3D01G255800.1 Wheat vacuole 57.62 61.92
TraesCS2B01G050700.2 Wheat cytosol 50.31 58.0
HORVU2Hr1G005560.1 Barley extracellular 55.76 57.77
TraesCS2B01G050800.1 Wheat extracellular, plasma membrane 54.52 56.77
TraesCS2D01G036500.1 Wheat plasma membrane 56.13 56.55
TraesCS2D01G036400.1 Wheat plasma membrane 54.4 56.5
HORVU2Hr1G005550.3 Barley extracellular, plasma membrane, plastid 54.03 56.11
TraesCS2A01G037100.1 Wheat plasma membrane 53.9 55.98
TraesCS3B01G286900.1 Wheat extracellular, plasma membrane 52.29 54.1
VIT_00s0878g00010.t01 Wine grape cytosol, nucleus 37.92 53.31
KRH01924 Soybean cytosol, nucleus 24.16 51.45
CDY65695 Canola plastid 33.71 50.28
KRH58852 Soybean nucleus 46.34 48.38
CDY65487 Canola extracellular, vacuole 45.97 47.87
Bra013212.1-P Field mustard extracellular, vacuole 45.85 47.74
CDY15084 Canola extracellular, vacuole 45.85 47.74
CDY37334 Canola extracellular 45.48 47.72
CDY40408 Canola extracellular 45.11 47.4
AT5G59810.1 Thale cress mitochondrion 45.6 47.3
VIT_19s0015g01420.t01 Wine grape extracellular, plasma membrane 44.98 47.27
KRH42754 Soybean extracellular, vacuole 45.23 47.22
Bra014350.1-P Field mustard extracellular 44.86 47.14
AT2G04160.1 Thale cress extracellular, vacuole 44.86 46.89
CDY65693 Canola extracellular, golgi 44.11 46.66
Bra020285.1-P Field mustard extracellular, plasma membrane 44.11 46.66
Solyc07g056170.2.1 Tomato nucleus 44.61 46.51
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 46.1 46.5
KRH51225 Soybean extracellular, plasma membrane 43.99 45.92
KXG35865 Sorghum extracellular, mitochondrion 45.72 45.22
KRH03962 Soybean extracellular, vacuole 42.87 44.82
Solyc12g011140.1.1 Tomato nucleus 42.5 44.43
OQU84580 Sorghum mitochondrion 48.45 43.93
KXG38048 Sorghum extracellular 41.88 43.67
PGSC0003DMT400044595 Potato extracellular, plasma membrane 28.25 43.51
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 42.13 43.42
EER90842 Sorghum extracellular, plasma membrane 40.89 43.19
KRH14771 Soybean nucleus 41.76 43.04
EER94293 Sorghum extracellular 40.77 42.89
EER90461 Sorghum extracellular, golgi 41.88 42.62
EER96794 Sorghum extracellular, plasma membrane 40.27 41.99
EES07654 Sorghum plastid 31.97 41.21
KRH40182 Soybean extracellular, vacuole 40.02 41.04
EES07632 Sorghum extracellular 39.9 40.91
KRH14769 Soybean extracellular 39.78 40.79
OQU93252 Sorghum extracellular 39.41 40.3
KRH01039 Soybean nucleus 40.02 40.12
EES12694 Sorghum extracellular, golgi, plasma membrane 38.29 39.77
EER92571 Sorghum extracellular, plasma membrane 38.54 39.37
EES13951 Sorghum extracellular 38.91 39.01
EES05894 Sorghum extracellular 37.3 38.59
KXG33299 Sorghum plastid 38.91 37.97
Protein Annotations
MapMan:19.4.2.1.5Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30UniProt:A0A1B6Q5K5GO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538InterPro:IPR036852EnsemblPlants:KXG33202ProteinID:KXG33202ProteinID:KXG33202.1InterPro:PA_domain
PFAM:PF00082PFAM:PF02225PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR43806PANTHER:PTHR43806:SF15
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3EnsemblPlantsGene:SORBI_3003G269900
SUPFAM:SSF52025SUPFAM:SSF52743SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081AC2E8SEG:seg
Description
hypothetical protein
Coordinates
chr3:+:60665534..60672517
Molecular Weight (calculated)
83707.8 Da
IEP (calculated)
6.630
GRAVY (calculated)
0.086
Length
807 amino acids
Sequence
(BLAST)
001: MGTGAGRRVL LLALVLLFAL QATPAASADK KPCVIFFSDF PASLNALLAT ITDDFFILPY NLRAISGVAL QIEQGFQPQL RKLPGVMAVI PDTLYKTHTT
101: HSWDFLGLAA SNGGEIAAAW SSAKLGEDTI IGVIDTGVWP ESQSFQNDTM LDVPLGRWHG TCEKGNDPTF QCNRKLIGAR FFSEGIQASG ALSGDGGQQP
201: PTSQADLSSP RDYVGHGSHT LSTAGGSFVR GASVYGHGKG TAAGGAPGAR VAMYKACYEP GCSGIDILAA ILKAVADGVH VLSLSLGAPP ADYLTDLTAI
301: GAFFAVQSGV TVVCSAGNSG PQPSTVTNLA PWIFTVAAST MDRDFPAYVS FNGSDSIQGQ SLAESTLPIG QPYQIISGEK ANAVNQPTGN SSLCLPGSLD
401: PDKVKGKIVV CVRGVNARVE KGFVVKQAGG VGMVLCNDAG TGDTVVADAH VLPAAHCSFS QCARLFTYLQ STNNPLGYIN ATDASFGVKP APKIAAFSSR
501: GPNAITPQIL KPDITAPGVN VIAAYSGAVS PTELPFDDRR VAYNIMSGTS MSCPHVSGIV GLLKTKYPTW SPAMIKSAIM TTASTTANDG NPIQDEAGAA
601: ATPFGYGSGH VDPVRALDPG LVYDTTLLDY TNFLCSSLKP TQATQGDPIP SLLPVDLPPV LGNLSQPVIN LLLLPLFNAA GEPCKCSQGP YGRPEDLNYP
701: SIAVPCLSGS GSGSGATATV KRRLKNVAGA PGKYKVTVTE PAGVKVTVAP SELEFRVGEE KEFTVTVKLD MDANAPAAAS TYVFGSIVWS DTAHRVRSPV
801: VVKTKCG
Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)
001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL
Arabidopsis Description
AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.