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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 86.97 86.97
KRH14769 Soybean extracellular 66.67 66.33
KRH01039 Soybean nucleus 59.26 57.64
KRH40182 Soybean extracellular, vacuole 57.85 57.56
KRH01047 Soybean cytosol 43.04 56.54
VIT_19s0015g01420.t01 Wine grape extracellular, plasma membrane 55.04 56.12
KRH03962 Soybean extracellular, vacuole 53.77 54.53
KRH58852 Soybean nucleus 52.23 52.91
KRH42754 Soybean extracellular, vacuole 51.98 52.65
GSMUA_Achr7P06110_001 Banana extracellular 49.55 52.08
GSMUA_Achr4P11390_001 Banana cytosol 48.4 52.06
KRH51225 Soybean extracellular, plasma membrane 51.34 52.01
GSMUA_Achr4P03940_001 Banana extracellular, plasma membrane 49.68 51.87
GSMUA_Achr4P13160_001 Banana endoplasmic reticulum, extracellular 48.15 51.64
GSMUA_Achr4P01730_001 Banana cytosol 50.45 51.1
Zm00001d020867_P001 Maize cytosol 42.27 48.89
Os09t0479900-01 Rice golgi 49.94 48.57
TraesCS5B01G255200.1 Wheat extracellular, plasma membrane 50.19 48.52
TraesCS5A01G255900.1 Wheat extracellular, mitochondrion, vacuole 50.19 48.34
TraesCS5D01G264000.1 Wheat nucleus 50.06 48.34
TraesCS6A01G161600.1 Wheat extracellular 48.28 48.09
HORVU5Hr1G071510.2 Barley extracellular, plasma membrane 49.55 47.78
KXG35865 Sorghum extracellular, mitochondrion 49.04 47.06
KRH01924 Soybean cytosol, nucleus 22.61 46.7
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 47.51 46.5
Zm00001d046793_P001 Maize extracellular, vacuole 46.62 46.5
GSMUA_Achr1P19410_001 Banana extracellular, vacuole 42.91 46.41
Os02t0198700-01 Rice plasma membrane 47.13 46.18
Zm00001d015798_P001 Maize plastid 48.66 46.13
TraesCS7B01G283300.1 Wheat extracellular, plasma membrane 46.62 45.74
TraesCS7A01G381400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 46.62 45.74
HORVU7Hr1G090870.1 Barley extracellular, plasma membrane, plastid 47.25 45.74
KRH01042 Soybean endoplasmic reticulum 4.6 45.57
TraesCS7D01G377700.1 Wheat extracellular, plasma membrane 46.74 45.3
TraesCS5D01G033200.1 Wheat cytosol 42.91 44.92
Zm00001d034924_P001 Maize plastid 44.83 44.37
EER90461 Sorghum extracellular, golgi 44.7 44.14
TraesCS5B01G024600.1 Wheat extracellular, plasma membrane, vacuole 43.17 43.78
Os01t0702300-00 Rice extracellular 39.46 42.98
OQU84580 Sorghum mitochondrion 48.79 42.92
HORVU5Hr1G007190.1 Barley extracellular, golgi 43.68 42.64
Os06t0609400-01 Rice cytosol, extracellular 9.2 42.11
TraesCS2B01G050700.2 Wheat cytosol 37.55 42.0
KXG33202 Sorghum extracellular, plasma membrane, vacuole 43.04 41.76
Zm00001d043731_P001 Maize plastid 34.35 41.71
TraesCS3D01G255800.1 Wheat vacuole 39.85 41.54
TraesCS3A01G254900.1 Wheat vacuole 40.49 41.33
KRG91405 Soybean nucleus 41.12 41.23
KRH60704 Soybean extracellular, plasma membrane 40.87 41.18
KRH35414 Soybean nucleus 41.0 41.05
KRH24297 Soybean nucleus 40.36 40.88
HORVU2Hr1G005560.1 Barley extracellular 40.49 40.69
TraesCS2D01G036400.1 Wheat plasma membrane 40.36 40.67
KRH58046 Soybean extracellular, vacuole 38.95 40.4
KRH04480 Soybean endoplasmic reticulum 39.21 40.39
KRH38672 Soybean nucleus 39.97 40.34
HORVU3Hr1G065810.1 Barley plasma membrane 39.59 40.16
KRH06267 Soybean plasma membrane 39.72 40.08
KRH15432 Soybean nucleus 39.59 40.05
TraesCS2A01G037100.1 Wheat plasma membrane 39.72 40.03
TraesCS2B01G050800.1 Wheat extracellular, plasma membrane 39.34 39.74
KRH28401 Soybean extracellular 39.08 39.74
KRH19326 Soybean extracellular, vacuole 38.06 39.68
KRH61386 Soybean nucleus 38.95 39.61
KRH47696 Soybean extracellular, nucleus 39.46 39.51
HORVU2Hr1G005550.3 Barley extracellular, plasma membrane, plastid 39.21 39.51
KRG97289 Soybean extracellular, plasma membrane 38.7 39.45
TraesCS2D01G036500.1 Wheat plasma membrane 40.36 39.45
KRH09188 Soybean nucleus 39.34 39.44
KRH52072 Soybean nucleus 38.7 39.4
KRH69016 Soybean extracellular, plasma membrane 38.7 39.35
KRH05609 Soybean extracellular, vacuole 38.95 39.25
KRH02601 Soybean cytosol, nucleus 35.38 39.12
KRH21143 Soybean nucleus 39.21 38.91
KRH70486 Soybean nucleus 38.31 38.86
HORVU6Hr1G032770.4 Barley plastid 39.34 38.69
KRH37498 Soybean nucleus 37.93 38.57
KRH76515 Soybean extracellular 38.06 38.45
KRH01628 Soybean nucleus 35.5 38.45
KRH62506 Soybean extracellular 31.29 37.23
KRH47618 Soybean extracellular 36.65 37.03
KRH12543 Soybean extracellular, golgi 21.46 36.05
TraesCS3B01G286900.1 Wheat extracellular, plasma membrane 33.97 34.1
KRH11105 Soybean cytosol 15.33 33.9
KRH06199 Soybean endoplasmic reticulum, nucleus 36.91 20.25
Protein Annotations
EntrezGene:100795195MapMan:19.4.2.1.5Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30
UniProt:A0A0R0GGN1EMBL:ACUP02008521EnsemblPlantsGene:GLYMA_14G048000GO:GO:0003674GO:GO:0003824GO:GO:0004252
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008236GO:GO:0016787
GO:GO:0019538InterPro:IPR036852InterPro:IPR037045EnsemblPlants:KRH14771ProteinID:KRH14771ProteinID:KRH14771.1
InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138
PANTHER:PTHR10795PANTHER:PTHR10795:SF522InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52743SignalP:SignalP-noTMUniParc:UPI0006EDB561
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr14:-:3712870..3717676
Molecular Weight (calculated)
84090.3 Da
IEP (calculated)
9.734
GRAVY (calculated)
-0.186
Length
783 amino acids
Sequence
(BLAST)
001: MAFSIFKHVL SLFLLCIFLQ EPTNALRKTY IVYMGGHSHG PDPLPSDLET ATNSHHDLLA SYLGSHEKAK EAIIYSYNKY INGFAALLEE EEASQIAKNP
101: NVVSIFLSKE RKLFTTRSWD FLGLEKNGKV TANSAWRKAR YGENIIIANI DTGVWPEHPS FSDKGYGPIP SKWRGKGVCQ IDSFNGTKKY LCNRKLIGAR
201: IFLKSREAGG GKVDQTLRSG RDLVGHGTHT LSTAGGNFVP GANVEGNGNG TAKGGSPRAR VVAYKACWNK LDEGGCYDAD ILEAFDHAIY DGVDVISASL
301: GGSNPYPEAL FTDGISIGAF HAVARNIVVV CSAGNDGPAP LSVTNVAPWS FTVAASTMDR DFRSRISLSN NQSIIGASLN RGLPSSSPSK KFYPVIYSVD
401: ARLPSVSIDD ARLCKPGTLD PTKVKGKILV CLRGNKLTSA SEGEQGKLAG AVAVLVQNDD PSDNLLLAEN HVLPAASISG TGSHNIKNGT GNNGNNKEIL
501: AYLSAAETYI GVKPAPIIAG FSSRGPSSVQ PLILKPDITA PGVNVIAAFT QGAGPSNLPS DRRRSLFNVQ QGTSMSCPHV AGIAGLLKTY HPTWSPAAIK
601: SAIMTTATTL DNTNQPIRNA FHKVATPFEY GAGHIQPNLA IDPGLVYDLR TTDYLNFLCA SGYNQALLNL FAKLKFPYTC PKSYRIEDFN YPSITVRHPG
701: SKTISVTRTV TNVGPPSTYV VNTHGPKGIK VLVQPSSLTF KRTGEKKKFQ VILQPIGARR GLFGNLSWTD GKHRVTSPIT ILP
Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)
001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL
Arabidopsis Description
AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.