CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70486	Soybean	nucleus	94.33	88.34
VIT_15s0048g01120.t01	Wine grape	cytosol	64.45	61.64
Solyc01g091920.2.1	Tomato	extracellular	62.66	59.76
PGSC0003DMT400000380	Potato	cytosol	60.58	59.59
VIT_15s0048g01180.t01	Wine grape	extracellular	62.24	58.67
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	66.39	57.9
GSMUA_Achr8P12040_001	Banana	extracellular, vacuole	43.15	52.53
Bra033226.1-P	Field mustard	extracellular, plasma membrane	52.7	50.33
AT1G01900.1	Thale cress	extracellular, plasma membrane	53.53	50.0
CDY15145	Canola	extracellular, plasma membrane	52.97	49.87
CDX90065	Canola	extracellular, plasma membrane	51.73	49.6
KRH02601	Soybean	cytosol, nucleus	45.37	46.33
KRH19326	Soybean	extracellular, vacuole	47.16	45.41
KRH01924	Soybean	cytosol, nucleus	23.51	44.85
KRH52072	Soybean	nucleus	47.58	44.73
KRH61386	Soybean	nucleus	47.44	44.55
KRH47618	Soybean	extracellular	47.72	44.52
KRH58046	Soybean	extracellular, vacuole	46.47	44.5
KRH47696	Soybean	extracellular, nucleus	48.13	44.5
KRH06267	Soybean	plasma membrane	47.58	44.33
KRH28401	Soybean	extracellular	47.16	44.29
KRH35414	Soybean	nucleus	47.86	44.25
KRH04480	Soybean	endoplasmic reticulum	46.47	44.21
KRH15432	Soybean	nucleus	47.16	44.06
KRG91405	Soybean	nucleus	47.44	43.92
KRG97289	Soybean	extracellular, plasma membrane	46.33	43.62
KRH05609	Soybean	extracellular, vacuole	46.61	43.37
KRH69016	Soybean	extracellular, plasma membrane	46.06	43.25
KRH38672	Soybean	nucleus	46.2	43.04
KRH09188	Soybean	nucleus	46.47	43.02
KRH60704	Soybean	extracellular, plasma membrane	46.2	42.99
KRH24297	Soybean	nucleus	45.92	42.95
KRH37498	Soybean	nucleus	45.64	42.86
KRH76515	Soybean	extracellular	44.26	41.29
KRH62506	Soybean	extracellular	37.07	40.73
KRH42754	Soybean	extracellular, vacuole	41.36	38.68
KRH58852	Soybean	nucleus	41.22	38.55
KRH11105	Soybean	cytosol	18.81	38.42
KRH03962	Soybean	extracellular, vacuole	40.94	38.34
KRH21143	Soybean	nucleus	41.22	37.77
KRH01047	Soybean	cytosol	31.12	37.75
KRH51225	Soybean	extracellular, plasma membrane	40.25	37.65
KRH12543	Soybean	extracellular, golgi	23.79	36.91
KRH40182	Soybean	extracellular, vacuole	39.42	36.21
KRH14771	Soybean	nucleus	38.45	35.5
KRH14773	Soybean	endoplasmic reticulum, extracellular, vacuole	38.04	35.12
KRH14769	Soybean	extracellular	38.04	34.94
KRH01039	Soybean	nucleus	37.21	33.42
VIT_15s0048g01170.t01	Wine grape	cytosol	62.38	30.62
KRH06199	Soybean	endoplasmic reticulum, nucleus	47.86	24.25
KRH01042	Soybean	endoplasmic reticulum	0.97	8.86

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	UniProt:A0A0R0F591
EMBL:ACUP02011523	EnsemblPlantsGene:GLYMA_18G288800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045
EnsemblPlants:KRH01628	ProteinID:KRH01628	ProteinID:KRH01628.1	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF387	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	SignalP:SignalP-noTM	UniParc:UPI00023D83E5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:56853815..56856371

Molecular Weight (calculated)

77784.8 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.147

Length

723 amino acids

Sequence
(BLAST)

001: MIFRILILFL ALMVTNSIAF SDQQTYIVHM DQTKIKASNQ DSTKPWYESI IDFISESSMQ EDDEEDILAP QLLYTYETSM FGFAVHLSKK HLKYLNQVDG
101: FLSAIPDELS TLHTTYSPHF LGLRNGRSLW SASNLATDVI IGVLDSGIWP EHISFQDSGM SPVPSHWKGV CEKGTKFSSS NCNKKLIGAR TYYKGYEKFF
201: GKKINETVDY LSPRDSEGHG THTASTAAGR VVKNANLFGQ ARGTASGMRN FCDSDSIAIA SFGATKKGVF VACSAGNSGP FPSTVGNGAP WITTVAASST
301: DRSFPTKVKL GNGKTFEGSS LYQGKKTNQL PLVYGKSAGA KKEAQYCIGG SLDPKLVHGK IVACERGING RTEKGEEVKV AGGAGMILLN NEYQGEELFA
401: DPHILPATSL GASASKTIRS YSQSVKKPTA SISFMGTRFG DPAPVMAAFS SRGPSLVGPD VIKPDVTAPG VNILAAWPSK ISPSFLMSDK RKVLFNILSG
501: TSMSCPHVSG IAALLKSFHK DWSPAAIKSA LMTTAYTLNN KGAPISDMAS DNSPFATPFA FGSGHVNPVN ASDPGLVYDI STKDYLNYLC SINYTSSQIA
601: LLSRGKFVCS KKTLLQAGNL NYPSFSVLFG RSASNASVTY RRVVTNVGNP QSAYAVKLEQ PNGVSVTVEP RKLKFEKVGQ KLSYKVTFLS IGGARVAGTS
701: SFGSLVWVSG KYKVRSPMAV TWK

Best Arabidopsis Sequence Match ( AT1G01900.1 )
(BLAST)

001: MHRFLLMLLF PFSDNRPMMF FRSFIVFFFL IFFASNVSSR KQTYVIHTVT TSTKHIVTSL FNSLQTENIN DDDFSLPEIH YIYENAMSGF SATLTDDQLD
101: TVKNTKGFIS AYPDELLSLH TTYSHEFLGL EFGIGLWNET SLSSDVIIGL VDTGISPEHV SFRDTHMTPV PSRWRGSCDE GTNFSSSECN KKIIGASAFY
201: KGYESIVGKI NETTDFRSTR DAQGHGTHTA STAAGDIVPK ANYFGQAKGL ASGMRFTSRI AAYKACWALG CASTDVIAAI DRAILDGVDV ISLSLGGSSR
301: PFYVDPIAIA GFGAMQKNIF VSCSAGNSGP TASTVSNGAP WLMTVAASYT DRTFPAIVRI GNRKSLVGSS LYKGKSLKNL PLAFNRTAGE ESGAVFCIRD
401: SLKRELVEGK IVICLRGASG RTAKGEEVKR SGGAAMLLVS TEAEGEELLA DPHVLPAVSL GFSDGKTLLN YLAGAANATA SVRFRGTAYG ATAPMVAAFS
501: SRGPSVAGPE IAKPDIAAPG LNILAGWSPF SSPSLLRSDP RRVQFNIISG TSMACPHISG IAALIKSVHG DWSPAMIKSA IMTTARITDN RNRPIGDRGA
601: AGAESAATAF AFGAGNVDPT RAVDPGLVYD TSTVDYLNYL CSLNYTSERI LLFSGTNYTC ASNAVVLSPG DLNYPSFAVN LVNGANLKTV RYKRTVTNVG
701: SPTCEYMVHV EEPKGVKVRV EPKVLKFQKA RERLSYTVTY DAEASRNSSS SSFGVLVWIC DKYNVRSPIA VTWE

Arabidopsis Description

SBTI1.1SBTI1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W900]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.