Factsheet for PGSC0003DMT400000380

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091920.2.1	Tomato	extracellular	96.33	93.4
VIT_15s0048g01120.t01	Wine grape	cytosol	67.35	65.48
KRH70486	Soybean	nucleus	64.35	61.27
VIT_15s0048g01180.t01	Wine grape	extracellular	63.81	61.15
KRH01628	Soybean	nucleus	59.59	60.58
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	66.8	59.23
GSMUA_Achr8P12040_001	Banana	extracellular, vacuole	46.53	57.58
Bra033226.1-P	Field mustard	extracellular, plasma membrane	57.41	55.75
CDX90065	Canola	extracellular, plasma membrane	56.6	55.17
CDY15145	Canola	extracellular, plasma membrane	57.41	54.95
AT1G01900.1	Thale cress	extracellular, plasma membrane	56.33	53.49
PGSC0003DMT400064275	Potato	cytosol	28.98	50.24
PGSC0003DMT400038500	Potato	cytosol	48.16	48.56
PGSC0003DMT400088012	Potato	extracellular	49.93	47.85
PGSC0003DMT400012537	Potato	extracellular	50.07	47.42
PGSC0003DMT400064274	Potato	extracellular	48.16	47.01
PGSC0003DMT400019555	Potato	endoplasmic reticulum, extracellular, golgi	48.44	46.05
PGSC0003DMT400015864	Potato	extracellular	48.3	45.98
PGSC0003DMT400071700	Potato	extracellular, plasma membrane	47.48	45.5
PGSC0003DMT400055410	Potato	extracellular	46.67	44.78
PGSC0003DMT400023608	Potato	extracellular	47.62	44.59
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	46.39	44.29
PGSC0003DMT400037563	Potato	extracellular, vacuole	45.99	44.01
PGSC0003DMT400018621	Potato	extracellular	42.18	40.0
PGSC0003DMT400044595	Potato	extracellular, plasma membrane	26.67	37.4
VIT_15s0048g01170.t01	Wine grape	cytosol	66.12	32.99
PGSC0003DMT400043856	Potato	plasma membrane, vacuole	45.44	29.27

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787
GO:GO:0019538	GO:GO:0030312	GO:GO:0031012	InterPro:IPR036852	InterPro:IPR037045	UniProt:M0ZGN4
InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	EnsemblPlantsGene:PGSC0003DMG400000134	PGSC:PGSC0003DMG400000134
EnsemblPlants:PGSC0003DMT400000380	PRINTS:PR00723	ScanProsite:PS00136	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF387
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Asp-AS	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.092	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI000295DCF9	SEG:seg

Description

Xylem serine proteinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000134]

Coordinates

chr1:-:71337837..71340591

Molecular Weight (calculated)

78674.0 Da

IEP (calculated)

9.673

GRAVY (calculated)

-0.137

Length

735 amino acids

Sequence
(BLAST)

001: MDKTKVRSLD SNLGISKRWY EDVISSISAD DSEEEQEEKP PQLLYVYEKS ISGFSAKLSK KQLESLKQVD GFLTAVPDEM LSLHTTHSPQ FLGLKSGRGL
101: WSGPNLTSDV IVGVIDTGIW PEHVSFRDFG MPPVPSRWKG KCEAGTKFAR SNCNRKIIGA RIFPKGYEAA AGKINEKEDY RSPRDSQGHG THTASTAAGN
201: LVNGANLFGL AKGLAGGMSY GSRIAVYKAC FMLGCSSSDV LAAIDQAVID GVDVLSLSLG GLPKPFYVDN IAIAAFGAVQ HGVFVSCSAG NSGPLNSSVG
301: NAAPWIMTVA ASSLDRSFPT TVKLGDGHVF KGASLYTGKP TMQLPLVYGR TAGGEGARFC TNGTLSSRLV KGKIVVCEKG INARAEKGEQ VKIAGGAGMI
401: MVNRVDEGDE LYADAHVLPA TSLGASAGIA IKKYINLTKT ATASIKLKGT VYGNRAPIVA AFSSRGPSAA GPDIIKPDVT APGVDILAAW PPNISPSMLK
501: SDKRSVQFNI LSGTSMSCPH VSGLAALLKS VHRDWSPAAI KSALMTTAYT LDKERTPIAD AVSETSISAT PFVFGSGHVD PERASDPGLI YDISTEDYLH
601: YICSLNYNSS QIALLLRENY TCPSHSFQSL GDLNYPSFAV LFDSNNQHLI QTFKRTVTNV GTPRSTYSVQ VKTPYGVSVT VKPKILKFQK KGQKLRYKVR
701: FVTRGKRSPG DSTFGSLTWI SRTHIVRSPI AVTWQ

Best Arabidopsis Sequence Match ( AT1G01900.1 )
(BLAST)

001: MHRFLLMLLF PFSDNRPMMF FRSFIVFFFL IFFASNVSSR KQTYVIHTVT TSTKHIVTSL FNSLQTENIN DDDFSLPEIH YIYENAMSGF SATLTDDQLD
101: TVKNTKGFIS AYPDELLSLH TTYSHEFLGL EFGIGLWNET SLSSDVIIGL VDTGISPEHV SFRDTHMTPV PSRWRGSCDE GTNFSSSECN KKIIGASAFY
201: KGYESIVGKI NETTDFRSTR DAQGHGTHTA STAAGDIVPK ANYFGQAKGL ASGMRFTSRI AAYKACWALG CASTDVIAAI DRAILDGVDV ISLSLGGSSR
301: PFYVDPIAIA GFGAMQKNIF VSCSAGNSGP TASTVSNGAP WLMTVAASYT DRTFPAIVRI GNRKSLVGSS LYKGKSLKNL PLAFNRTAGE ESGAVFCIRD
401: SLKRELVEGK IVICLRGASG RTAKGEEVKR SGGAAMLLVS TEAEGEELLA DPHVLPAVSL GFSDGKTLLN YLAGAANATA SVRFRGTAYG ATAPMVAAFS
501: SRGPSVAGPE IAKPDIAAPG LNILAGWSPF SSPSLLRSDP RRVQFNIISG TSMACPHISG IAALIKSVHG DWSPAMIKSA IMTTARITDN RNRPIGDRGA
601: AGAESAATAF AFGAGNVDPT RAVDPGLVYD TSTVDYLNYL CSLNYTSERI LLFSGTNYTC ASNAVVLSPG DLNYPSFAVN LVNGANLKTV RYKRTVTNVG
701: SPTCEYMVHV EEPKGVKVRV EPKVLKFQKA RERLSYTVTY DAEASRNSSS SSFGVLVWIC DKYNVRSPIA VTWE

Arabidopsis Description

SBTI1.1SBTI1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W900]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.