Factsheet for PGSC0003DMT400018621

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071580.2.1	Tomato	nucleus	97.29	97.29
VIT_10s0003g02220.t01	Wine grape	nucleus	65.29	65.46
CDY13044	Canola	extracellular	61.42	61.34
CDY23110	Canola	extracellular	61.42	61.34
Bra017598.1-P	Field mustard	extracellular	61.55	60.38
AT5G45650.2	Thale cress	extracellular, plasma membrane, vacuole	61.29	60.05
GSMUA_Achr6P26130_001	Banana	cytosol	48.52	59.97
KRH21143	Soybean	nucleus	57.55	56.53
TraesCS3B01G317300.1	Wheat	unclear	56.65	56.35
TraesCS3A01G284000.1	Wheat	plasma membrane, vacuole	53.55	56.31
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	56.52	56.3
TraesCS3A01G283600.2	Wheat	vacuole	56.13	55.91
Os01t0727800-01	Rice	cytosol, plastid	27.23	54.52
AT5G45640.1	Thale cress	extracellular, golgi	52.65	54.11
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	52.52	53.69
HORVU3Hr1G069030.12	Barley	cytosol, mitochondrion	51.87	53.53
Zm00001d043581_P001	Maize	mitochondrion	55.48	53.35
KXG33299	Sorghum	plastid	56.0	52.48
PGSC0003DMT400064275	Potato	cytosol	26.97	49.29
KRH11105	Soybean	cytosol	21.68	47.46
Os01t0727840-00	Rice	extracellular	9.55	47.44
PGSC0003DMT400038500	Potato	cytosol	43.61	46.36
PGSC0003DMT400044595	Potato	extracellular, plasma membrane	31.1	45.99
PGSC0003DMT400064274	Potato	extracellular	44.39	45.68
PGSC0003DMT400055410	Potato	extracellular	43.61	44.13
PGSC0003DMT400071700	Potato	extracellular, plasma membrane	43.61	44.07
PGSC0003DMT400088012	Potato	extracellular	42.84	43.29
PGSC0003DMT400015864	Potato	extracellular	42.32	42.49
PGSC0003DMT400000380	Potato	cytosol	40.0	42.18
PGSC0003DMT400012537	Potato	extracellular	41.55	41.49
PGSC0003DMT400037563	Potato	extracellular, vacuole	40.9	41.28
PGSC0003DMT400023608	Potato	extracellular	41.29	40.76
PGSC0003DMT400019555	Potato	endoplasmic reticulum, extracellular, golgi	40.52	40.62
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	39.48	39.74
PGSC0003DMT400043856	Potato	plasma membrane, vacuole	40.65	27.61

Protein Annotations

EntrezGene:102598868	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:M1AAX9	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	EnsemblPlantsGene:PGSC0003DMG400007225	PGSC:PGSC0003DMG400007225	EnsemblPlants:PGSC0003DMT400018621
PRINTS:PR00723	PANTHER:PTHR10795	PANTHER:PTHR10795:SF375	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3	MEROPS:S08.082	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM
UniParc:UPI00029557C0	RefSeq:XP_006355620.1	SEG:seg	:	:	:

Description

Xylem serine proteinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400007225]

Coordinates

chr2:-:30869721..30876734

Molecular Weight (calculated)

83259.4 Da

IEP (calculated)

8.972

GRAVY (calculated)

-0.189

Length

775 amino acids

Sequence
(BLAST)

001: MNSFSTLSFL LLLVLPLLAS CHEKQVYIVY FGGHNEEKAL YEIEENHHSY LLSVKDNEEE AKSSLIYSYK HSINGFAALL TPHQASKLSE LEEVVSVYKS
101: EPRKYSLHTT RSWEFSGVEE SVAPNSLNKD DLLLKARYGK DVIIGVLDSG LWPESKSFSD EGIGPIPKSW KGICQSGDAF NSSNCNKKII GARYYIKGYE
201: QYYGPLNRTL DYLSPRDKDG HGTHTSSTAG GKKVPNASAI GGFASGTALG GAPLARLAMY KVCWAIPREG KEDGNTCFEE DMLAALDDAI ADGVDVISIS
301: IGTKQPQPFD QDSIAIGALH AMKKNIVVSC SAGNSGPAPS TLSNTAPWII TVGASSVDRK FLSPIVLGNG KKFMGQTVTP YKLKKKMYPL VYAGEVINTN
401: VTKDLAGQCL PGSLSPEKAK GKIVMCLRGN GTRVGKGGEV KRAGGIGYIL GNSKANGAEL AADAHLLPAT AVDYKSGVQI LNYISSTKSP VAYIVPAKTV
501: LHAKPAPYMA SFTSRGPSAV APDILKPDIT APGLNILAAW SGGSSPTKLD IDNRVVEYNI LSGTSMSCPH VGGAAALLKA IHPTWSSAAI RSALITSAEL
601: QNNVGEQITD ASGKPADPFQ FGGGHFRPSK AADPGLVYDA SYQDYLLFLC ASGVKDLDKS FKCPKKSHSP RDLNYPSLAI PNLNDTVTAR RRLTNVGAPK
701: SIYYASAKPP LGFSIEISPP VLAFNHVGSE RTFTITVKAH RDMMHRIPKD QYVFGWYSWN DGIHNVRSPI AVKLA

Best Arabidopsis Sequence Match ( AT5G45650.2 )
(BLAST)

001: MKKLTSLFPL LFLIPLLASC AEEKQVYIVY FGEHKGDKAF HEIEEHHHSY LQSVKESEED ARASLLYSYK HSINGFAAEL TPDQASKLEK LAEVVSVFKS
101: HPRKYEAHTT RSWEFVGLEE EETDSDVPRR KNDADDRFRV GRNFLKKAKH GDGIIVGVLD SGVWPESKSF NDKGMGPVPK SWKGICQTGV AFNSSHCNRK
201: IIGARYYVKG YERYYGAFNA TANKDFLSPR DPDGHGSHTA STAVGRRVLG ASALGGFAKG SASGGAPLAR LAIYKACWAK PNAEKVEGNI CLEEDMLAAI
301: DDAIADGVHV ISISIGTTEP FPFTQDGIAM GALHAVKRNI VVAASAGNSG PKPGTLSNLA PWIITVGAST LDRAFVGGLV LGNGYTIKTD SITAFKMDKF
401: APLVYASNVV VPGIALNETS QCLPNSLKPE LVSGKVVLCL RGAGSRIGKG MEVKRAGGAG MILGNIAANG NEVPSDSHFV PTAGVTPTVV DKILEYIKTD
501: KNPKAFIKPG KTVYKYQAAP SMTGFSSRGP NVVDPNILKP DITAPGLYIL AAWSGADSPS KMSVDQRVAG YNIYSGTSMS CPHVAGAIAL LKAIHPKWSS
601: AAIRSALMTT AWMTNDKKKP IQDTTGLPAN PFALGSGHFR PTKAADPGLV YDASYRAYLL YGCSVNITNI DPTFKCPSKI PPGYNHNYPS IAVPNLKKTV
701: TVKRTVTNVG TGNSTSTYLF SVKPPSGISV KAIPNILSFN RIGQKQRFKI VIKPLKNQVM NATEKGQYQF GWFSWTDKVH VVRSPIAVSL A

Arabidopsis Description

SBT5.6Subtilisin-like protease SBT5.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK76]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.