CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90065	Canola	extracellular, plasma membrane	95.7	97.48
AT1G01900.1	Thale cress	extracellular, plasma membrane	85.16	84.5
PGSC0003DMT400000380	Potato	cytosol	54.95	57.41
Solyc01g091920.2.1	Tomato	extracellular	56.12	56.86
VIT_15s0048g01120.t01	Wine grape	cytosol	54.43	55.29
KRH70486	Soybean	nucleus	53.65	53.37
KRH01628	Soybean	nucleus	49.87	52.97
VIT_15s0048g01180.t01	Wine grape	extracellular	52.34	52.41
GSMUA_Achr8P12040_001	Banana	extracellular, vacuole	39.97	51.68
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	55.73	51.63
CDY43568	Canola	plastid	14.06	50.23
CDY57437	Canola	extracellular	45.31	45.79
CDY29697	Canola	extracellular	44.4	45.65
CDY12840	Canola	extracellular	45.05	45.53
CDY18654	Canola	extracellular, plasma membrane	44.14	45.5
CDX97539	Canola	plastid	28.39	45.32
CDY63302	Canola	extracellular, vacuole	44.14	45.32
CDY55359	Canola	extracellular, vacuole	41.54	45.31
CDY67452	Canola	extracellular, plasma membrane	44.01	45.19
CDY18651	Canola	extracellular, plasma membrane	44.01	45.01
CDX75757	Canola	cytosol, plastid	23.57	44.91
CDX97560	Canola	extracellular	44.53	44.42
CDY63300	Canola	extracellular	41.41	44.41
CDY66924	Canola	cytosol	32.42	44.38
CDX98438	Canola	extracellular	44.4	44.29
CDY33400	Canola	extracellular, plasma membrane	43.23	44.21
CDX82491	Canola	extracellular	44.14	44.2
CDY18653	Canola	extracellular, plasma membrane	41.15	44.07
CDY44380	Canola	extracellular	39.45	44.04
CDY18042	Canola	extracellular, plasma membrane	41.8	43.55
CDX80285	Canola	cytosol, plastid	23.57	43.41
CDY00497	Canola	extracellular, plasma membrane	43.75	43.35
CDX99895	Canola	extracellular, plasma membrane	43.75	43.35
CDY52259	Canola	extracellular, plasma membrane, vacuole	41.54	43.34
CDY33251	Canola	plasma membrane	43.23	42.84
CDY22001	Canola	extracellular, plasma membrane	40.89	42.78
CDY39093	Canola	plasma membrane	43.1	42.71
CDX72509	Canola	extracellular, plasma membrane	42.06	42.67
CDY40653	Canola	extracellular, vacuole	42.58	42.63
CDY63219	Canola	extracellular	40.36	41.72
CDY65487	Canola	extracellular, vacuole	41.93	41.55
CDY15084	Canola	extracellular, vacuole	41.8	41.42
CDY65695	Canola	plastid	29.17	41.4
CDY40408	Canola	extracellular	40.36	40.36
CDY37334	Canola	extracellular	40.23	40.18
CDY65693	Canola	extracellular, golgi	38.67	38.93
CDY13044	Canola	extracellular	38.93	38.53
CDY23110	Canola	extracellular	38.8	38.4
VIT_15s0048g01170.t01	Wine grape	cytosol	54.3	28.31

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:A0A078FL24
UniProt:A0A078FL24	EnsemblPlants:CDY15145	ProteinID:CDY15145	ProteinID:CDY15145.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00085316001	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00136	ScanProsite:PS00138
PANTHER:PTHR10795	PANTHER:PTHR10795:SF387	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Asp-AS	InterPro:Peptidase_S8_Ser-AS
InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.155	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEA2C1	SEG:seg	:	:

Description

BnaC05g00240DBnaC05g00240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL24]

Coordinates

chrLK032052:-:123281..126923

Molecular Weight (calculated)

82214.5 Da

IEP (calculated)

8.154

GRAVY (calculated)

-0.024

Length

768 amino acids

Sequence
(BLAST)

001: MLFFPFCDNR PMMFIRSLLF LFFLFFTSNA SSFKQTYVIH TVKTNTKDIV SSLLNSLQTD SNIQDDNDFA LPEIHYIYEN AMSGFSATLT DDQLETVKNS
101: RGFISAYPDE LLSLHTTHSH EFLGLEFGIR LWNETSLSSD VIIGLVDTGI SPEHVSFRDT HMPPVPSRWR GSCDEGTNFS SSSCNKKIIG AGAYYKGYES
201: IVGKINETTD FRSARDAQGH GTHTASTAAG DIVRKASYFG VAKGRFASGM RFSSRIAAYK ACWALGCAST DVLAAIDRAI LDGVDVISLS LGGSSRPFYV
301: DPIAIAAFGA MQKNVFVSCS AGNSGPAKST VSNGAPWLMT VAASYTDRTF PAIVRIGTGK KIVGSSLYKG RGFENLSLAF NTTAGGGSGA EFCVRNSLRR
401: ELVEGKIVIC LRGAGGRTTK GEEVKQNGGV AMLLVSRVTE GEELLADPHV LPAVSIGYSD GVVLLKYIAG GGGTANATVA SIGFRGTEYG ARAPIVAAFS
501: SRGPSVAGPE IVKPDISAPG LNILAGWSPF SSPSLLRSDQ RRVQFNIISG TSMACPHVSG IAALIKSVHG DWSPAMIKSA LLTTASTTDN RNQPIGDMGA
601: GPNSAATAFD FGAGHVDPTR AVDPGLVYDL STVDYLNYLC SLDYTSERIL LFSGTNYTCP ASPGDLNYPS FAVNLANGAK LKTVRSYRRT VTNVGSPACE
701: YMAHVEEPKG VEVRVEPKVL KFQKVRERLS YTVTFAAEAS RNSSSSFGAL VWISDKHKVR SPLAVTWE

Best Arabidopsis Sequence Match ( AT1G01900.1 )
(BLAST)

001: MHRFLLMLLF PFSDNRPMMF FRSFIVFFFL IFFASNVSSR KQTYVIHTVT TSTKHIVTSL FNSLQTENIN DDDFSLPEIH YIYENAMSGF SATLTDDQLD
101: TVKNTKGFIS AYPDELLSLH TTYSHEFLGL EFGIGLWNET SLSSDVIIGL VDTGISPEHV SFRDTHMTPV PSRWRGSCDE GTNFSSSECN KKIIGASAFY
201: KGYESIVGKI NETTDFRSTR DAQGHGTHTA STAAGDIVPK ANYFGQAKGL ASGMRFTSRI AAYKACWALG CASTDVIAAI DRAILDGVDV ISLSLGGSSR
301: PFYVDPIAIA GFGAMQKNIF VSCSAGNSGP TASTVSNGAP WLMTVAASYT DRTFPAIVRI GNRKSLVGSS LYKGKSLKNL PLAFNRTAGE ESGAVFCIRD
401: SLKRELVEGK IVICLRGASG RTAKGEEVKR SGGAAMLLVS TEAEGEELLA DPHVLPAVSL GFSDGKTLLN YLAGAANATA SVRFRGTAYG ATAPMVAAFS
501: SRGPSVAGPE IAKPDIAAPG LNILAGWSPF SSPSLLRSDP RRVQFNIISG TSMACPHISG IAALIKSVHG DWSPAMIKSA IMTTARITDN RNRPIGDRGA
601: AGAESAATAF AFGAGNVDPT RAVDPGLVYD TSTVDYLNYL CSLNYTSERI LLFSGTNYTC ASNAVVLSPG DLNYPSFAVN LVNGANLKTV RYKRTVTNVG
701: SPTCEYMVHV EEPKGVKVRV EPKVLKFQKA RERLSYTVTY DAEASRNSSS SSFGVLVWIC DKYNVRSPIA VTWE

Arabidopsis Description

SBTI1.1SBTI1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W900]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.