Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
 nucleus: 21132161
nucleus: 27291164
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH35414 Soybean nucleus 96.16 96.04
KRH09188 Soybean nucleus 78.62 78.62
KRH38672 Soybean nucleus 77.46 77.96
VIT_16s0022g02200.t01 Wine grape extracellular, vacuole 75.54 76.23
PGSC0003DMT400019555 Potato endoplasmic reticulum, extracellular, golgi 72.73 73.48
Solyc03g006970.1.1 Tomato nucleus 72.34 72.9
KRH62506 Soybean extracellular 59.92 71.12
AT5G51750.1 Thale cress extracellular, plasma membrane, vacuole 70.17 70.26
Bra028274.1-P Field mustard extracellular, plasma membrane 69.65 70.19
CDY00497 Canola extracellular, plasma membrane 69.65 70.19
CDX99895 Canola extracellular, plasma membrane 69.4 69.94
Zm00001d026068_P001 Maize mitochondrion 67.09 67.44
TraesCS2A01G398900.1 Wheat golgi 67.09 67.44
TraesCS2B01G416900.1 Wheat extracellular, plasma membrane 67.09 67.35
EES12694 Sorghum extracellular, golgi, plasma membrane 66.84 67.18
TraesCS2D01G396400.1 Wheat golgi 66.84 67.18
GSMUA_Achr5P20160_001 Banana extracellular 50.83 64.87
HORVU2Hr1G094670.1 Barley extracellular 45.84 62.7
Os04t0573300-00 Rice extracellular 62.74 55.37
KRH58046 Soybean extracellular, vacuole 52.11 53.91
KRH04480 Soybean endoplasmic reticulum 52.11 53.55
KRG97289 Soybean extracellular, plasma membrane 49.81 50.65
KRH61386 Soybean nucleus 49.81 50.52
KRH02601 Soybean cytosol, nucleus 45.58 50.28
KRH52072 Soybean nucleus 49.42 50.2
KRH19326 Soybean extracellular, vacuole 48.14 50.07
KRH15432 Soybean nucleus 49.55 50.0
KRH24297 Soybean nucleus 49.3 49.81
KRH69016 Soybean extracellular, plasma membrane 49.04 49.74
KRH47696 Soybean extracellular, nucleus 49.55 49.49
KRH06267 Soybean plasma membrane 49.04 49.36
KRH37498 Soybean nucleus 48.66 49.35
KRH05609 Soybean extracellular, vacuole 49.04 49.29
KRH28401 Soybean extracellular 48.53 49.22
KRH60704 Soybean extracellular, plasma membrane 48.27 48.52
KRH12543 Soybean extracellular, golgi 28.43 47.64
KRH01628 Soybean nucleus 43.92 47.44
KRH70486 Soybean nucleus 46.86 47.41
KRH47618 Soybean extracellular 46.86 47.23
KRH76515 Soybean extracellular 46.09 46.45
KRH01924 Soybean cytosol, nucleus 21.38 44.06
KRH51225 Soybean extracellular, plasma membrane 41.87 42.3
KRH42754 Soybean extracellular, vacuole 40.72 41.14
KRH14771 Soybean nucleus 41.23 41.12
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 40.97 40.87
KRH58852 Soybean nucleus 40.33 40.75
KRH14769 Soybean extracellular 40.97 40.66
KRH03962 Soybean extracellular, vacuole 39.82 40.28
KRH01047 Soybean cytosol 30.47 39.93
KRH21143 Soybean nucleus 39.44 39.04
KRH40182 Soybean extracellular, vacuole 39.31 39.01
KRH01039 Soybean nucleus 38.16 37.02
KRH11105 Soybean cytosol 15.75 34.75
KRH06199 Soybean endoplasmic reticulum, nucleus 46.61 25.51
KRH01042 Soybean endoplasmic reticulum 1.41 13.92
Protein Annotations
EntrezGene:102661592MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30
EMBL:ACUP02012682EnsemblPlantsGene:GLYMA_20G152600GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008236GO:GO:0016787GO:GO:0019538
UniProt:I1NGM4InterPro:IPR036852InterPro:IPR037045EnsemblPlants:KRG91405ProteinID:KRG91405ProteinID:KRG91405.1
InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138
PANTHER:PTHR10795PANTHER:PTHR10795:SF322InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52743SUPFAM:SSF54897SignalP:SignalP-noTM
UniParc:UPI0002956A98SEG:seg::::
Description
hypothetical protein
Coordinates
chr20:+:39136641..39139372
Molecular Weight (calculated)
84509.1 Da
IEP (calculated)
9.101
GRAVY (calculated)
-0.169
Length
781 amino acids
Sequence
(BLAST)
001: MFTSPITPME KMALILASYL VLSTLFSANA EFVKKTYIIQ MDKSAKPDTF TNHLNWYSSK VKSILSNSVE AEMDQEERII YTYQTAFHGL AAMLSQEEAE
101: KLEAEEGVVA IFPDTKYQLH TTRSPTFLGL EPTQSTNNMW SLKLANHDVI VGVLDTGVWP ESESFNDTGM RPVPSHWKGA CETGRGFRKH HCNKKIVGAR
201: MFYHGYEAAT GKIDEQAEYK SPRDQDGHGT HTAATVAGSP VHGANFLGYA YGTARGMAPG ARIAAYKVCW TGGCFSSDIL SAVDRAVADG VDVLSISLGG
301: GVSSYYRDSL SVAAFGAMEK GVFVSCSAGN AGPDPVSLTN VSPWITTVGA STMDRDFPAD VRLGNGRKIT GTSLYKGRSM LSVKKQYPLV YMGNTNSSIP
401: DPKSLCLEGT LDRRMVSGKI VICDRGISPR VQKGQVVKNA GGAGMILTNT AANGEELVAD CHLLPAVAIG EKEGKELKRY VLTSKKATAT LGFQATRLGV
501: RPSPVVAAFS SRGPNFLTLE ILKPDVVAPG VNILAAWSEA IGPSSLPTDH RRVKFNILSG TSMSCPHVSG IAALLKARHP DWSPAAIKSA LMTTAYVHDN
601: TIKPLRDASN AEASTPYDHG AGHINPRRAL DPGLVYDIQP QDYFEFLCTQ KLTTSELGVF AKYSNRTCKH SLSSPGDLNY PAISVVFPLK NSTSVLTVHR
701: TATNVGLPVS KYHVVVSPFK GASVKVEPDT LSFTRKYQKL SYKITLTTQS RQTEPEFGGL VWKDGVHKVR SPIVITYLPP I
Best Arabidopsis Sequence Match ( AT5G51750.1 )
(BLAST)
001: MANKNPLQKP FLFIILSINL IFLQAETTTQ ISTKKTYVIH MDKSAMPLPY TNHLQWYSSK INSVTQHKSQ EEEGNNNRIL YTYQTAFHGL AAQLTQEEAE
101: RLEEEDGVVA VIPETRYELH TTRSPTFLGL ERQESERVWA ERVTDHDVVV GVLDTGIWPE SESFNDTGMS PVPATWRGAC ETGKRFLKRN CNRKIVGARV
201: FYRGYEAATG KIDEELEYKS PRDRDGHGTH TAATVAGSPV KGANLFGFAY GTARGMAQKA RVAAYKVCWV GGCFSSDILS AVDQAVADGV QVLSISLGGG
301: VSTYSRDSLS IATFGAMEMG VFVSCSAGNG GPDPISLTNV SPWITTVGAS TMDRDFPATV KIGTMRTFKG VSLYKGRTVL PKNKQYPLVY LGRNASSPDP
401: TSFCLDGALD RRHVAGKIVI CDRGVTPRVQ KGQVVKRAGG IGMVLTNTAT NGEELVADSH MLPAVAVGEK EGKLIKQYAM TSKKATASLE ILGTRIGIKP
501: SPVVAAFSSR GPNFLSLEIL KPDLLAPGVN ILAAWTGDMA PSSLSSDPRR VKFNILSGTS MSCPHVSGVA ALIKSRHPDW SPAAIKSALM TTAYVHDNMF
601: KPLTDASGAA PSSPYDHGAG HIDPLRATDP GLVYDIGPQE YFEFLCTQDL SPSQLKVFTK HSNRTCKHTL AKNPGNLNYP AISALFPENT HVKAMTLRRT
701: VTNVGPHISS YKVSVSPFKG ASVTVQPKTL NFTSKHQKLS YTVTFRTRFR MKRPEFGGLV WKSTTHKVRS PVIITWLPPL
Arabidopsis Description
SBT1.3Subtilisin-like protease SBT1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI4]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.