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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH42754 Soybean extracellular, vacuole 95.08 95.08
PGSC0003DMT400044595 Potato extracellular, plasma membrane 47.48 70.04
Solyc07g056170.2.1 Tomato nucleus 69.73 69.64
Bra013212.1-P Field mustard extracellular, vacuole 65.33 65.16
CDY65487 Canola extracellular, vacuole 65.2 65.03
CDY15084 Canola extracellular, vacuole 64.81 64.65
AT2G04160.1 Thale cress extracellular, vacuole 63.39 63.47
GSMUA_Achr4P11390_001 Banana cytosol 58.99 62.64
Solyc12g011140.1.1 Tomato nucleus 61.71 61.79
GSMUA_Achr4P03940_001 Banana extracellular, plasma membrane 59.9 61.73
GSMUA_Achr4P01730_001 Banana cytosol 61.71 61.71
KRH51225 Soybean extracellular, plasma membrane 60.28 60.28
GSMUA_Achr4P13160_001 Banana endoplasmic reticulum, extracellular 56.92 60.27
KRH01924 Soybean cytosol, nucleus 29.11 59.37
KRH03962 Soybean extracellular, vacuole 57.57 57.64
Zm00001d020867_P001 Maize cytosol 50.32 57.46
Os09t0479900-01 Rice golgi 59.64 57.27
TraesCS5D01G264000.1 Wheat nucleus 59.77 56.97
TraesCS5A01G255900.1 Wheat extracellular, mitochondrion, vacuole 59.77 56.83
TraesCS5B01G255200.1 Wheat extracellular, plasma membrane 59.51 56.79
HORVU5Hr1G071510.2 Barley extracellular, plasma membrane 59.51 56.65
Os02t0198700-01 Rice plasma membrane 58.21 56.32
GSMUA_Achr7P06110_001 Banana extracellular 54.08 56.11
TraesCS6A01G161600.1 Wheat extracellular 56.66 55.73
KXG35865 Sorghum extracellular, mitochondrion 58.73 55.64
Zm00001d046793_P001 Maize extracellular, vacuole 55.89 55.03
Zm00001d015798_P001 Maize plastid 58.34 54.6
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 55.63 53.75
TraesCS7B01G283300.1 Wheat extracellular, plasma membrane 53.95 52.26
KRH14771 Soybean nucleus 52.91 52.23
TraesCS7A01G381400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 53.82 52.13
TraesCS7D01G377700.1 Wheat extracellular, plasma membrane 54.2 51.86
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 52.52 51.85
HORVU7Hr1G090870.1 Barley extracellular, plasma membrane, plastid 54.2 51.79
TraesCS5D01G033200.1 Wheat cytosol 49.68 51.34
KRH40182 Soybean extracellular, vacuole 51.75 50.83
KRH01047 Soybean cytosol 38.81 50.34
OQU84580 Sorghum mitochondrion 57.83 50.22
Zm00001d034924_P001 Maize plastid 51.36 50.19
TraesCS5B01G024600.1 Wheat extracellular, plasma membrane, vacuole 50.06 50.13
EER90461 Sorghum extracellular, golgi 51.23 49.94
KRH14769 Soybean extracellular 50.84 49.94
KRH01039 Soybean nucleus 51.1 49.07
Os01t0702300-00 Rice extracellular 45.28 48.68
HORVU5Hr1G007190.1 Barley extracellular, golgi 50.45 48.63
Os06t0609400-01 Rice cytosol, extracellular 10.61 47.95
GSMUA_Achr1P19410_001 Banana extracellular, vacuole 44.5 47.51
TraesCS3D01G255800.1 Wheat vacuole 46.05 47.4
Zm00001d043731_P001 Maize plastid 39.33 47.13
TraesCS3A01G254900.1 Wheat vacuole 46.44 46.81
TraesCS2B01G050700.2 Wheat cytosol 42.04 46.43
KXG33202 Sorghum extracellular, plasma membrane, vacuole 48.38 46.34
HORVU3Hr1G065810.1 Barley plasma membrane 46.18 46.24
HORVU6Hr1G032770.4 Barley plastid 47.22 45.85
KRH58046 Soybean extracellular, vacuole 44.63 45.7
KRH04480 Soybean endoplasmic reticulum 44.89 45.66
HORVU2Hr1G005550.3 Barley extracellular, plasma membrane, plastid 45.41 45.17
HORVU2Hr1G005560.1 Barley extracellular 45.15 44.8
TraesCS2D01G036400.1 Wheat plasma membrane 45.02 44.79
TraesCS2B01G050800.1 Wheat extracellular, plasma membrane 44.89 44.77
TraesCS2A01G037100.1 Wheat plasma membrane 44.37 44.14
KRH24297 Soybean nucleus 43.98 43.98
TraesCS2D01G036500.1 Wheat plasma membrane 45.41 43.82
KRH28401 Soybean extracellular 42.82 42.99
KRH60704 Soybean extracellular, plasma membrane 43.08 42.86
KRH52072 Soybean nucleus 42.43 42.65
KRH19326 Soybean extracellular, vacuole 41.27 42.48
KRH15432 Soybean nucleus 42.43 42.38
KRH37498 Soybean nucleus 42.17 42.34
KRH61386 Soybean nucleus 42.04 42.21
KRH21143 Soybean nucleus 43.08 42.21
KRH06267 Soybean plasma membrane 42.17 42.01
KRH70486 Soybean nucleus 41.66 41.71
KRH47696 Soybean extracellular, nucleus 42.17 41.69
KRH05609 Soybean extracellular, vacuole 41.53 41.31
KRH47618 Soybean extracellular 41.4 41.29
KRH38672 Soybean nucleus 41.4 41.24
KRH01628 Soybean nucleus 38.55 41.22
KRH76515 Soybean extracellular 41.14 41.03
KRH02601 Soybean cytosol, nucleus 37.52 40.96
KRH35414 Soybean nucleus 41.14 40.66
KRG97289 Soybean extracellular, plasma membrane 40.36 40.62
KRH12543 Soybean extracellular, golgi 24.45 40.56
KRH11105 Soybean cytosol 18.5 40.4
KRG91405 Soybean nucleus 40.75 40.33
KRH09188 Soybean nucleus 40.75 40.33
KRH69016 Soybean extracellular, plasma membrane 39.97 40.13
TraesCS3B01G286900.1 Wheat extracellular, plasma membrane 39.84 39.49
KRH62506 Soybean extracellular 32.21 37.84
KRH01042 Soybean endoplasmic reticulum 3.36 32.91
KRH06199 Soybean endoplasmic reticulum, nucleus 42.17 22.85
Protein Annotations
EntrezGene:100794807MapMan:19.4.2.1.5Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30
EMBL:ACUP02003292EnsemblPlantsGene:GLYMA_05G152200GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538UniProt:I1K3S7InterPro:IPR036852
InterPro:IPR037045EnsemblPlants:KRH58852ProteinID:KRH58852ProteinID:KRH58852.1InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF423
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3MEROPS:S08.119
InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52025SUPFAM:SSF52743SignalP:SignalP-noTMUniParc:UPI0002339DEC
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:-:34567026..34574255
Molecular Weight (calculated)
83299.5 Da
IEP (calculated)
9.307
GRAVY (calculated)
-0.068
Length
773 amino acids
Sequence
(BLAST)
001: MRPPSSSIHF LLQILLVFLL HRPSFALKKS YVVYLGAHSH KPELSSVDFN QVTQSHHEFL GSFLGSSNTT KDSIFYSYTR HINGFAAILE EEVAAEISKH
101: PKVLSVFENR GRKLHTTRSW DFMGLEHNGV IQSNSIWKKA RFGEGVIIGN LDTGVWPESK SFSEEGLGPI PSKWRGICHN GIDHTFHCNR KLIGARYFNK
201: GYASVAGPLN SSFDSPRDNE GHGTHTLSTA GGNMVARVSV FGQGHGTAKG GSPMARVAAY KVCWPPVAGD ECFDADILAA FDLAIHDGVD VLSLSLGGSA
301: STFFKDSVAI GSFHAAKHGI VVVCSAGNSG PADATAENLA PWHVTVAAST MDRQFPTYVF LGNNITFKGE SLSATILAPK FYPIIKATDA KLASARAEDA
401: VLCQNGTLDP NKVKGKIVVC LRGINARVDK GEQAFLAGAV GMVLANDKTT GNEIIADPHV LPASHINFTD GSAVFTYINS TKFPVAYITH PKTQLDTKPA
501: PFMAAFSSKG PNTIVPEILK PDITAPGVSV IAAYTEAQGP TNQVFDKRRI PFNSVSGTSM SCPHVSGIVG LLRALYPTWS PAAIKSAIMT TATTLDNEVE
601: PLLNATDGKA TPFSYGAGHV QPNRAMDPGL VYDTTIDDYL NFLCALGYNA TQISVFTEGP YQCRKKFSLL NLNYPSITVP KLSGSVTVTR RLKNVGSPGT
701: YIAHVQNPHG ITISVKPSIL KFKNVGEEKS FKVTFKAMQG KATNNYVFGK LIWSDGKHYV TSPIVVKALL TRN
Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)
001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL
Arabidopsis Description
AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.