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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G050800.1 Wheat extracellular, plasma membrane 86.23 86.45
TraesCS2A01G037100.1 Wheat plasma membrane 80.18 80.18
TraesCS2D01G036400.1 Wheat plasma membrane 79.28 79.28
HORVU2Hr1G005560.1 Barley extracellular 78.64 78.43
HORVU3Hr1G065810.1 Barley plasma membrane 62.55 62.95
Os01t0702300-00 Rice extracellular 51.74 55.91
Zm00001d043731_P001 Maize plastid 45.69 55.04
KXG33202 Sorghum extracellular, plasma membrane, vacuole 56.11 54.03
VIT_00s0878g00010.t01 Wine grape cytosol, nucleus 37.71 51.05
KRH01924 Soybean cytosol, nucleus 23.17 47.49
CDY65695 Canola plastid 32.56 46.77
KRH58852 Soybean nucleus 45.17 45.41
CDY65487 Canola extracellular, vacuole 45.17 45.29
CDY15084 Canola extracellular, vacuole 45.17 45.29
Bra013212.1-P Field mustard extracellular, vacuole 45.17 45.29
KRH42754 Soybean extracellular, vacuole 44.53 44.76
CDY40408 Canola extracellular 44.14 44.66
VIT_19s0015g01420.t01 Wine grape extracellular, plasma membrane 44.14 44.66
CDY37334 Canola extracellular 44.14 44.6
Bra014350.1-P Field mustard extracellular 43.89 44.4
AT5G59810.1 Thale cress mitochondrion 44.4 44.34
Solyc07g056170.2.1 Tomato nucleus 43.89 44.06
Bra020285.1-P Field mustard extracellular, plasma membrane 43.24 44.04
CDY65693 Canola extracellular, golgi 43.24 44.04
AT2G04160.1 Thale cress extracellular, vacuole 43.5 43.78
HORVU5Hr1G071510.2 Barley extracellular, plasma membrane 45.56 43.6
PGSC0003DMT400044595 Potato extracellular, plasma membrane 28.96 42.94
KRH03962 Soybean extracellular, vacuole 42.6 42.88
KRH51225 Soybean extracellular, plasma membrane 42.6 42.82
Solyc12g011140.1.1 Tomato nucleus 42.21 42.49
HORVU4Hr1G013170.1 Barley extracellular 40.93 41.19
HORVU7Hr1G090870.1 Barley extracellular, plasma membrane, plastid 42.08 40.42
HORVU5Hr1G097150.1 Barley extracellular, vacuole 39.25 39.92
KRH14771 Soybean nucleus 39.51 39.21
KRH14773 Soybean endoplasmic reticulum, extracellular, vacuole 39.51 39.21
KRH40182 Soybean extracellular, vacuole 39.25 38.75
HORVU7Hr1G043090.1 Barley vacuole 38.35 38.75
HORVU5Hr1G007190.1 Barley extracellular, golgi 39.9 38.65
KRH14769 Soybean extracellular 39.0 38.5
HORVU6Hr1G081640.1 Barley endoplasmic reticulum, extracellular, vacuole 38.61 38.22
HORVU2Hr1G094670.1 Barley extracellular 28.06 38.18
HORVU6Hr1G032770.4 Barley plastid 38.35 37.44
KRH01039 Soybean nucleus 38.74 37.39
HORVU6Hr1G081710.1 Barley extracellular 37.45 37.16
HORVU3Hr1G069030.12 Barley cytosol, mitochondrion 35.65 36.88
HORVU6Hr1G081730.1 Barley plastid 38.35 36.16
HORVU6Hr1G081750.1 Barley extracellular, plasma membrane 37.71 35.39
HORVU6Hr1G081850.2 Barley cytosol, plastid 35.78 35.15
HORVU3Hr1G093190.2 Barley mitochondrion 37.97 34.83
HORVU5Hr1G027960.1 Barley plastid 20.08 34.82
HORVU6Hr1G018160.1 Barley extracellular, mitochondrion, plasma membrane 36.42 34.6
HORVU5Hr1G061990.1 Barley extracellular, vacuole 33.72 32.31
HORVU4Hr1G063870.1 Barley plastid 36.81 32.21
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1GO:GO:0003674GO:GO:0003824
GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:HORVU2Hr1G005550EnsemblPlants:HORVU2Hr1G005550.3InterPro:IPR036852UniProt:M0XRT5InterPro:PA_domainPFAM:PF00082
PFAM:PF02225PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR43806PANTHER:PTHR43806:SF15InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3SUPFAM:SSF52743SignalP:SignalP-noTM
UniParc:UPI000295741ASEG:seg::::
Description
No Description!
Coordinates
chrchr2H:-:12010821..12017096
Molecular Weight (calculated)
81562.2 Da
IEP (calculated)
6.665
GRAVY (calculated)
0.029
Length
777 amino acids
Sequence
(BLAST)
001: MGRGAGRVVL LALALLLVVR ATPASAAPKS YLVMASQRPA SWSALLTPIT SQFRIFYIFD SINGIALRID NVFVSALKLF GRYTYTVLPG VAVIEDKLYE
101: VRTTHSWGFL GLEGLDGEPI DVWKNDVDFG EGVIIANVDT GVSPISASFR DDGSLPKPDR WRGGCQQGYS GCNNKLVGAR VFNEGIKLLS KQLNETEVNS
201: PWDHDGHGTH TLSTAGGAFV PNAGAFGRGT GTAKGGSPRA HVASYKACFT TGCSSLDILM AILTAVEDGV HVLSLSVGSP ASDYVADTIA IGTAYAVTQS
301: VVVVAAGGND GPAAGSISNV APWMLTVGAS TMDRLFPADV IIGTKTIKGQ SLSNSTSQPC VMISGEKANA AGQSAANSAL CLPGSLDPAK VSGKIVVCTR
401: GGSNGRVAKG QVVKDAGGVG MVLCNDAASG DNVIADPHII PAAHCSYSKC LEILSYIQST GSPVGEIKTK DEEVGVEPSP VMAAFSSRGP NTITPQILKP
501: DIIAPGVSVI AAYSEEVSPT GLDSDHRRVP YMVESGTSMS CPHVAGIAGL LRKKYPKWNP NMVYSAIMTT ATRLANDDAG IRDETGGAAT PFSYGSGHVN
601: PVRALDPGLV YDTTIHDYAN FICSMRPTDT QGLLPVPLPL GLEELWTLLI RMFRGADSDP FKCSKDNNHP EDLNYPSISA PCLPTSGSFT VKRRVKNVGG
701: GAASYTVRIT QPAGVTVTVN PSTLSFDGKN PEEEKHFMVT LKVYNADMAA DYVFGGIGWV DGKHYVWSPI VATTKCG
Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)
001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL
Arabidopsis Description
AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.