Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G217700.1 Wheat endoplasmic reticulum, extracellular, vacuole 75.34 79.15
TraesCS5B01G209500.1 Wheat endoplasmic reticulum, extracellular, vacuole 74.85 78.53
TraesCS5A01G214200.1 Wheat mitochondrion 74.97 72.21
Os09t0441000-00 Rice extracellular, vacuole 68.56 72.21
Zm00001d020627_P001 Maize extracellular 68.06 72.06
EER96794 Sorghum extracellular, plasma membrane 68.19 71.45
GSMUA_Achr3P10320_001 Banana extracellular 39.95 55.67
KRH12543 Soybean extracellular, golgi 31.2 54.29
HORVU7Hr1G043090.1 Barley vacuole 49.32 52.02
KRH37498 Soybean nucleus 48.58 51.17
KRH02601 Soybean cytosol, nucleus 44.51 50.99
VIT_11s0016g00960.t01 Wine grape extracellular, vacuole 47.1 50.2
KRH19326 Soybean extracellular, vacuole 46.36 50.07
PGSC0003DMT400071700 Potato extracellular, plasma membrane 47.35 50.07
Solyc07g041970.2.1 Tomato extracellular 46.86 49.87
CDY33400 Canola extracellular, plasma membrane 45.01 48.6
CDY18042 Canola extracellular, plasma membrane 44.02 48.44
AT2G05920.1 Thale cress extracellular, plasma membrane 44.88 48.28
Bra015172.1-P Field mustard extracellular, plasma membrane 45.38 48.23
PGSC0003DMT400037563 Potato extracellular, vacuole 44.14 46.61
HORVU2Hr1G094670.1 Barley extracellular 32.68 46.41
HORVU5Hr1G097150.1 Barley extracellular, vacuole 43.16 45.81
HORVU4Hr1G013170.1 Barley extracellular 42.91 45.08
Solyc08g067990.1.1 Tomato extracellular 43.53 43.96
HORVU3Hr1G093190.2 Barley mitochondrion 40.07 38.37
HORVU6Hr1G081640.1 Barley endoplasmic reticulum, extracellular, vacuole 36.74 37.96
HORVU5Hr1G071510.2 Barley extracellular, plasma membrane 37.24 37.19
HORVU6Hr1G081710.1 Barley extracellular 35.88 37.16
HORVU4Hr1G063870.1 Barley plastid 40.57 37.05
HORVU6Hr1G018160.1 Barley extracellular, mitochondrion, plasma membrane 37.36 37.04
HORVU6Hr1G081730.1 Barley plastid 37.36 36.77
HORVU6Hr1G081750.1 Barley extracellular, plasma membrane 37.24 36.47
HORVU6Hr1G081850.2 Barley cytosol, plastid 35.27 36.16
HORVU5Hr1G027960.1 Barley plastid 19.11 34.6
HORVU3Hr1G065810.1 Barley plasma membrane 32.8 34.46
HORVU7Hr1G090870.1 Barley extracellular, plasma membrane, plastid 33.91 33.99
HORVU2Hr1G005550.3 Barley extracellular, plasma membrane, plastid 32.31 33.72
HORVU3Hr1G069030.12 Barley cytosol, mitochondrion 30.83 33.29
HORVU5Hr1G007190.1 Barley extracellular, golgi 32.68 33.04
HORVU2Hr1G005560.1 Barley extracellular 30.58 31.84
HORVU6Hr1G032770.4 Barley plastid 30.33 30.9
Protein Annotations
MapMan:19.4.2.1.1Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30UniProt:A0A287RGU2GO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:HORVU5Hr1G061990EnsemblPlants:HORVU5Hr1G061990.1InterPro:IPR036852InterPro:IPR037045InterPro:PA_domain
PFAM:PF00082PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795
PANTHER:PTHR10795:SF437InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52743SignalP:SignalP-noTMUniParc:UPI000B477159SEG:seg
Description
No Description!
Coordinates
chrchr5H:-:482696742..482700377
Molecular Weight (calculated)
85670.5 Da
IEP (calculated)
10.717
GRAVY (calculated)
-0.222
Length
811 amino acids
Sequence
(BLAST)
001: MQQPPLVVLL LIVCLASSSS SALGDEGAAA TYIVYLNPAL KPSPYATHLQ WHHAHLDALS VDPERHLLYS YTTAAPSAFA ARLLPSHVAE LRAHPAVASV
101: HEDVLHPLHT TRSPSFLHLP PYSGPAPNAD GGSSDVIVGV LDTGVWPESP SFVDAGMGPV PSRWRGSCET NATDFPSSMC NRKLIGARGF FRGFGAGGRN
201: GSSHGTTELS SPRDHDGHGT HTASTAAGAV VADASLLGYA HGTARGMAPG ARVAAYKVCW RQGCFSSDIL AGMEQAIEDG VDVLSLSLGG GSYPLSRDPI
301: AVGALAATRR GIVVACSAGN SGPAPSSLVN TAPWIITVGA GTLDRNFPAY AKLGNGETHA GMSLYSGDGL GDDKLPLVYN KGIRAGSNAS KLCMSGTLDA
401: GAVKGKVVLC DRGGNSRVEK GQVVKLAGGV GMVLANTGQS GEEIVADSHL LPAVAVGAKS GDAIRAYVES DAGAEVALSF GGTAVDVHPA PVVAAFSSRG
501: PNRQVAQLLK PDVIGPGVNI LAGWTGSVGP TGLTIDERRP AFNILSGTSM SCPHISGLAA FVKAAHPDWS PSAIKSALMT TAYTVDNTGS PLLDAAGANA
601: TATHGHAMVL RLRPRRPREG PLPGPRLRHV HRRLRRLPVH RRRRLAPAGA GRHGGAERDV PAEAVQPRRP QLPVLLRRVR PPQVAHHRQV PPRADQRRRR
701: RVGVRGQGHR PAQHRRVREA GKARVQEGRG QAQVHRRVQV DGAGRPDGRR VRMADVEQRG AGRAEPDIVY VGDVRLVRWP CRRSDRRGRS MEVLHRLEEF
801: WLLISVLLKR R
Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)
001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF
Arabidopsis Description
SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.