Factsheet for Solyc07g041970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 26583031
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071700	Potato	extracellular, plasma membrane	97.9	97.26
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	73.75	73.85
KRH37498	Soybean	nucleus	71.39	70.65
Bra015172.1-P	Field mustard	extracellular, plasma membrane	70.73	70.64
CDY33400	Canola	extracellular, plasma membrane	69.42	70.44
CDY18042	Canola	extracellular, plasma membrane	67.85	70.15
AT2G05920.1	Thale cress	extracellular, plasma membrane	69.29	70.03
KRH19326	Soybean	extracellular, vacuole	65.49	66.44
GSMUA_Achr10P...	Banana	extracellular	50.66	66.21
KRH12543	Soybean	extracellular, golgi	39.76	65.02
KRH02601	Soybean	cytosol, nucleus	60.37	64.97
Os10t0394200-01	Rice	nucleus	38.06	63.74
Solyc08g067990.1.1	Tomato	extracellular	66.4	63.01
EER94293	Sorghum	extracellular	59.45	59.06
TraesCS7D01G213300.1	Wheat	vacuole	59.45	58.98
TraesCS7B01G118600.1	Wheat	vacuole	59.45	58.98
HORVU7Hr1G043090.1	Barley	vacuole	59.45	58.91
TraesCS7A01G211600.1	Wheat	vacuole	59.32	58.85
GSMUA_Achr3P10320_001	Banana	extracellular	44.75	58.59
Zm00001d033039_P001	Maize	plasma membrane	58.27	57.44
EER96794	Sorghum	extracellular, plasma membrane	58.14	57.24
Zm00001d020627_P001	Maize	extracellular	57.35	57.05
TraesCS5B01G209500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.74	56.92
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.61	56.87
Os09t0441000-00	Rice	extracellular, vacuole	57.35	56.75
Solyc02g092670.1.1	Tomato	extracellular	54.46	55.04
Solyc02g092680.1.1	Tomato	extracellular	52.23	52.86
Solyc03g044150.2.1	Tomato	extracellular	52.89	52.27
TraesCS5A01G214200.1	Wheat	mitochondrion	57.74	52.26
Solyc04g078110.1.1	Tomato	extracellular	52.36	52.09
Solyc03g006970.1.1	Tomato	nucleus	50.39	49.55
Solyc06g062950.1.1	Tomato	extracellular	50.39	49.48
Solyc01g111400.2.1	Tomato	nucleus	49.08	48.45
HORVU5Hr1G061990.1	Barley	extracellular, vacuole	49.87	46.86
Solyc06g083720.1.1	Tomato	nucleus	46.85	46.3
Solyc01g091920.2.1	Tomato	extracellular	45.93	46.17
Solyc02g021220.1.1	Tomato	extracellular, vacuole	47.77	45.84
Solyc03g123490.1.1	Tomato	nucleus	46.72	45.52
Solyc07g056170.2.1	Tomato	nucleus	44.36	43.67
Solyc02g071580.2.1	Tomato	nucleus	44.09	43.35
Solyc12g011140.1.1	Tomato	nucleus	41.86	41.32
Solyc02g071560.2.1	Tomato	extracellular, plasma membrane, vacuole	38.98	38.42

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:K4CE62
InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138
PANTHER:PTHR10795	PANTHER:PTHR10795:SF335	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3	MEROPS:S08.A24	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743
SUPFAM:SSF54897	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g041970.2	EnsemblPlants:Solyc07g041970.2.1	UniParc:UPI000276BC0A	SEG:seg

Description

No Description!

Coordinates

chr7:+:54714227..54717136

Molecular Weight (calculated)

81589.1 Da

IEP (calculated)

9.054

GRAVY (calculated)

-0.156

Length

762 amino acids

Sequence
(BLAST)

001: MGSLFCFSLI AFLLVLHPCF AKKTYIVHVK HQQKPPSYST HHDWYDAQLK SLSSSSNSES LLYSYDTAYP GFAASLDPHE AELLRQSEDV VGVYEDTVYT
101: LHTTRTPEFL GLDNELGVWA GHTQQELNSA AQDVIIGVLD TGVWPESKSF SDVGMPDVPS RWRGECESGP DFDPKVHCNK KLVGARFFAK GYRMSSSSSF
201: ANQPRQPESP RDQDGHGTHT ASTAAGAPVG NASLFGYASG IARGMAPRAR VATYKVCWPT GCFGSDILAG MDRAILDGVD VLSLSLGGGS GPYYRDTIAI
301: GGFSAMEKGI VVSCSAGNSG PAKASLANTA PWIMTVGAGT IDRDFPAYAV LGNGKKITGV SLYSGKGMGK KLVSLVYNTD SSSSLCLPGS LNPKDVRGKI
401: VVCDRGTNAR VEKGLVVKEA GGVGMILANT VESGEELVAD SHLLPAVAVG RKLGNAIRQY VKSERNPTAL LSFGGTVVNV KPSPVVAAFS SRGPNTVTPQ
501: ILKPDLIGPG VNILAAWSEA IGPTGLEKDT RRTKFNIMSG TSMSCPHISG LAALLKAAHP EWSPSAIKSA LMTTAYNRDT TNSPLRDAEG DQLSTPWAHG
601: AGHVDPHKAL SPGLVYDIRP KEYIKFLCSL DYEMEHIQAI VKRPNVTCAK KFSDPGQINY PSFAVLFGKS RVVRYTRTLT NVGAAGSTYE VVIDAPPSVT
701: VTVKPSKLVF KKVGERLRYT VTFVSKKGVS TMSKTTFGSI SWNNAQNQVR SPVSYSWSQL FN

Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)

001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF

Arabidopsis Description

SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.