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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033039_P001 Maize plasma membrane 94.13 93.4
Os10t0394200-01 Rice nucleus 50.59 85.27
TraesCS7D01G213300.1 Wheat vacuole 83.83 83.72
HORVU7Hr1G043090.1 Barley vacuole 83.57 83.36
TraesCS7B01G118600.1 Wheat vacuole 83.44 83.33
TraesCS7A01G211600.1 Wheat vacuole 83.31 83.2
GSMUA_Achr10P... Banana extracellular 52.93 69.64
VIT_11s0016g00960.t01 Wine grape extracellular, vacuole 60.5 60.97
KRH19326 Soybean extracellular, vacuole 58.54 59.79
KRH02601 Soybean cytosol, nucleus 55.15 59.75
Bra015172.1-P Field mustard extracellular, plasma membrane 59.32 59.63
EER96794 Sorghum extracellular, plasma membrane 60.1 59.56
AT2G05920.1 Thale cress extracellular, plasma membrane 58.54 59.55
Solyc07g041970.2.1 Tomato extracellular 59.06 59.45
CDY33400 Canola extracellular, plasma membrane 58.15 59.39
CDY18042 Canola extracellular, plasma membrane 56.84 59.16
KRH37498 Soybean nucleus 59.32 59.09
PGSC0003DMT400071700 Potato extracellular, plasma membrane 59.06 59.06
PGSC0003DMT400037563 Potato extracellular, vacuole 55.41 55.34
KRH12543 Soybean extracellular, golgi 33.25 54.72
KXG38048 Sorghum extracellular 53.85 53.36
Solyc08g067990.1.1 Tomato extracellular 55.67 53.18
EER90842 Sorghum extracellular, plasma membrane 50.98 51.18
EES12694 Sorghum extracellular, golgi, plasma membrane 51.5 50.84
EES13951 Sorghum extracellular 51.37 48.94
EER92571 Sorghum extracellular, plasma membrane 50.33 48.86
EES07632 Sorghum extracellular 49.15 47.9
EES05894 Sorghum extracellular 46.68 45.9
EES07654 Sorghum plastid 36.77 45.05
OQU93252 Sorghum extracellular 46.28 44.99
KXG35865 Sorghum extracellular, mitochondrion 43.81 41.18
EER90461 Sorghum extracellular, golgi 42.37 40.98
KXG33202 Sorghum extracellular, plasma membrane, vacuole 42.89 40.77
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 40.94 39.25
KXG33299 Sorghum plastid 41.33 38.33
OQU84580 Sorghum mitochondrion 41.33 35.62
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30EntrezGene:8062779
UniProt:C5WN62EnsemblPlants:EER94293ProteinID:EER94293ProteinID:EER94293.1GO:GO:0003674GO:GO:0003824
GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
InterPro:IPR036852InterPro:IPR037045InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922
PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF335InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3001G258100
SUPFAM:SSF52025SUPFAM:SSF52743SignalP:SignalP-noTMUniParc:UPI0001A833AARefSeq:XP_002467295.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:30561196..30565169
Molecular Weight (calculated)
79291.0 Da
IEP (calculated)
9.696
GRAVY (calculated)
0.101
Length
767 amino acids
Sequence
(BLAST)
001: MELALPFLLL ALLASPSLAH ANGNGSNTTT YIVFMDPARM PAVHRTPAHW HAAHLESLSI DPSRHLLYSY SAAAHGFAAA LLPGHLPLLR GSPEVLQVVP
101: DEVFQLHTTR SPEFLGLLTP AYQPAIGNLE AATHDVVIGV LDTGVWPESP SFAGGNLPPP PARWKGVCEA GVDFPPSLCG RKLVGARSFS RGLHAANGGA
201: IGVGKRTFRS ARDRDGHGTH TATTAAGAVV ANASLLGYAT GTARGMAPGA RVAAYKVCWP EGCLGSDILA GIDAAVADGV GVLSLSLGGG SAPYFRDTVA
301: VGAFGAAAAG VFVSCSAGNS GPSGATVSNS APWVATVGAG TLDRDFPAYV TLPTGVRLPG VSLYAGPSPS PRPAMLPLLY GGGRDNASKL CLSGTLDPAA
401: VRGKIVLCDR GVNARVEKGA VVKAAGGAGM ILANTAASGE ELVADSHLLP AVAVGRMVGD KIREYAARGR GGGRPMAMLS FGGTVLGVRP SPVVAAFSSR
501: GPNTVVPEIL KPDMIGPGVN ILAAWTGVAG PTGLAKDGRR THFNIISGTS MSCPHISGVA ALMKAAHPDW SPAAIKSALM TTAYTVDNTN SSLRDAADGS
601: LANAFAYGAG HVDPQKALSP GLVYDISTND YAAFLCSLNY SAPHIQVITK TSNVSCPKKF RPGDLNYPSF SVVFNQKSKP VQRFRRELTN VGPATSVYNV
701: KVISPESVAV TVTPAKLTFK KAGQKLRYHV TFASKAGQSH AKPDFGWISW VNDEHVVRSP VAYTWKM
Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)
001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF
Arabidopsis Description
SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.