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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033194_P001 Maize extracellular 92.25 93.46
Os03t0605300-01 Rice extracellular 84.11 85.1
TraesCS4B01G077600.1 Wheat extracellular 82.56 83.31
TraesCS4D01G076000.1 Wheat extracellular 81.78 82.85
TraesCS4A01G237500.1 Wheat unclear 81.91 82.66
HORVU4Hr1G013170.1 Barley extracellular 82.04 82.25
GSMUA_Achr6P11180_001 Banana plastid 45.22 71.28
GSMUA_Achr6P34760_001 Banana extracellular 55.94 70.98
GSMUA_Achr9P09530_001 Banana extracellular, vacuole 67.83 69.35
EER90842 Sorghum extracellular, plasma membrane 66.93 67.8
PGSC0003DMT400064275 Potato cytosol 36.43 66.51
AT5G67360.1 Thale cress extracellular, plasma membrane 63.82 65.26
PGSC0003DMT400038500 Potato cytosol 61.11 64.88
Bra012157.1-P Field mustard extracellular 63.57 64.74
CDY57437 Canola extracellular 63.57 64.74
CDY12840 Canola extracellular 63.44 64.61
VIT_18s0001g09360.t01 Wine grape extracellular 63.31 64.05
PGSC0003DMT400064274 Potato extracellular 62.14 63.88
Solyc02g092670.1.1 Tomato extracellular 62.02 63.66
Solyc04g078110.1.1 Tomato extracellular 62.02 62.66
VIT_07s0129g00490.t01 Wine grape extracellular 61.63 62.19
PGSC0003DMT400055410 Potato extracellular 61.5 62.14
KRH58046 Soybean extracellular, vacuole 60.59 62.12
KRH04480 Soybean endoplasmic reticulum 60.98 62.11
Solyc03g044150.2.1 Tomato extracellular 61.63 61.87
Bra037113.1-P Field mustard cytosol 57.49 61.63
KRH52072 Soybean nucleus 61.11 61.51
KRH61386 Soybean nucleus 61.11 61.43
Solyc02g092680.1.1 Tomato extracellular 59.69 61.35
CDY18653 Canola extracellular, plasma membrane 56.72 61.23
CDY55359 Canola extracellular, vacuole 55.56 61.08
CDY18654 Canola extracellular, plasma membrane 58.79 61.07
Bra021614.1-P Field mustard extracellular 59.69 61.03
CDY29697 Canola extracellular 58.66 60.78
CDY63300 Canola extracellular 56.2 60.75
Bra037112.1-P Field mustard extracellular, plasma membrane 59.3 60.55
CDY44380 Canola extracellular 53.49 60.17
CDY67452 Canola extracellular, plasma membrane 58.01 60.03
Bra033113.1-P Field mustard extracellular 52.97 59.85
CDY18651 Canola extracellular, plasma membrane 58.01 59.79
KRH05609 Soybean extracellular, vacuole 59.95 59.72
Bra037115.1-P Field mustard extracellular, plasma membrane 58.79 59.4
KRH15432 Soybean nucleus 59.3 59.3
CDY22001 Canola extracellular, plasma membrane 55.17 58.17
CDY66924 Canola cytosol 41.99 57.93
CDY43568 Canola plastid 16.02 57.67
CDY63302 Canola extracellular, vacuole 55.68 57.62
Bra039051.1-P Field mustard extracellular, plasma membrane 54.52 57.49
CDY63219 Canola extracellular 55.04 57.34
Bra036803.1-P Field mustard extracellular 41.21 57.27
KRH28401 Soybean extracellular 55.94 56.23
CDX80285 Canola cytosol, plastid 29.97 55.64
KRH76515 Soybean extracellular 54.65 54.58
EER94293 Sorghum extracellular 53.36 53.85
EES12694 Sorghum extracellular, golgi, plasma membrane 53.36 53.15
EER96794 Sorghum extracellular, plasma membrane 51.81 51.81
EES07632 Sorghum extracellular 50.52 49.68
EER92571 Sorghum extracellular, plasma membrane 50.52 49.49
EES07654 Sorghum plastid 39.66 49.04
EES13951 Sorghum extracellular 50.78 48.82
EES05894 Sorghum extracellular 48.45 48.08
OQU93252 Sorghum extracellular 47.03 46.13
KXG35865 Sorghum extracellular, mitochondrion 45.35 43.01
KXG33202 Sorghum extracellular, plasma membrane, vacuole 43.67 41.88
EER90461 Sorghum extracellular, golgi 42.89 41.87
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 41.86 40.5
KXG33299 Sorghum plastid 42.64 39.9
OQU84580 Sorghum mitochondrion 43.67 37.98
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30UniProt:A0A1B6QJE8
GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006464GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016740GO:GO:0016787GO:GO:0018024
GO:GO:0019538InterPro:IPR036852InterPro:IPR037045EnsemblPlants:KXG38048ProteinID:KXG38048ProteinID:KXG38048.2
InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138
PANTHER:PTHR10795PANTHER:PTHR10795:SF469InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3001G170700SUPFAM:SSF52743SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B8BA671SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:-:14258092..14260431
Molecular Weight (calculated)
79062.0 Da
IEP (calculated)
6.380
GRAVY (calculated)
0.046
Length
774 amino acids
Sequence
(BLAST)
001: MRSIGMLRPL LLALAVAAAA TTAVAVAADK RKTYIVHMAK SAMPAEYADD HAEWYGASLR SVSTSTPAAK MLYAYDTVLH GFSARLTPQE ASDLASADGV
101: LAVNPEARYE LHTTRTPEFL GIAGGQEGLF PQSGTAADVV VGVLDTGAWP ESKSYDDAGL PEVPSWWKGA CESGASGFDA ASACNRKLVG ARFFSKGYEA
201: AMGPMDTDRE SRSPRDDDGH GTHTSSTAAG AAVPGASLFG FAAGTARGMA PRARVAVYKV CWLGGCFSSD ILAGMDAAVA DGCGVLSLSL DYSRDSVAIG
301: AFAATEQNVL VSCSAGNAGP GSSTLSNVAP WITTVGAGTL DRDFPAYVVL GDGKNYTGVS LYSGNKPLPS APIPIVYAAN ASNSTAGNLC MPGTLTPEKV
401: AGKIVLCDRG VSARVQKGLV VRDAGGAGMV LSNTAANGQE LVADAHLLPA AGVGEREGTA IKSYVASDPN PTATIVVAGT QVGVRPSPVV AAFSSRGPNM
501: VTPEILKPDM IAPGVNILAA WTGKAGPTGL EADTRRVGFN IISGTSMSCP HVSGLAALLR SAHPEWSPAA VRSALMTTAY ASYSGGGSSS PLLDAATGAA
601: ATPFDYGAGH VDPARAVDPG LVYDLGTRDY VDFLCALKYS STMIAAVARS GQYACAENKT YSVGSLNYPS FSVAYSTANG DGGGDSTTTV THTRTLTSVG
701: GAGTYKVSTA LAAAKGVAVD VEPAELEFTK VGEKKSYTVK FTSKSQPSGT TGFGRLVWSD GKHSVASPIA FTWT
Best Arabidopsis Sequence Match ( AT5G67360.1 )
(BLAST)
001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT
Arabidopsis Description
SBT1.7Subtilisin-like protease SBT1.7 [Source:UniProtKB/Swiss-Prot;Acc:O65351]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.