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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:extracellular
 unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G076000.1 Wheat extracellular 97.39 97.77
TraesCS4B01G077600.1 Wheat extracellular 97.0 97.0
HORVU4Hr1G013170.1 Barley extracellular 95.31 94.69
Os03t0605300-01 Rice extracellular 85.01 85.23
Zm00001d033194_P001 Maize extracellular 82.14 82.46
KXG38048 Sorghum extracellular 82.66 81.91
GSMUA_Achr6P11180_001 Banana plastid 45.37 70.88
GSMUA_Achr6P34760_001 Banana extracellular 55.67 70.0
GSMUA_Achr9P09530_001 Banana extracellular, vacuole 68.32 69.22
TraesCS5A01G399800.1 Wheat golgi 67.01 67.19
PGSC0003DMT400064275 Potato cytosol 36.9 66.75
PGSC0003DMT400038500 Potato cytosol 62.84 66.12
AT5G67360.1 Thale cress extracellular, plasma membrane 64.93 65.79
Solyc02g092670.1.1 Tomato extracellular 64.54 65.65
PGSC0003DMT400064274 Potato extracellular 64.41 65.6
CDY12840 Canola extracellular 64.54 65.13
CDY57437 Canola extracellular 64.28 64.87
Bra012157.1-P Field mustard extracellular 64.15 64.74
Solyc03g044150.2.1 Tomato extracellular 63.75 63.42
KRH58046 Soybean extracellular, vacuole 62.19 63.18
Solyc04g078110.1.1 Tomato extracellular 62.97 63.05
KRH04480 Soybean endoplasmic reticulum 62.32 62.89
VIT_18s0001g09360.t01 Wine grape extracellular 62.71 62.88
PGSC0003DMT400055410 Potato extracellular 62.71 62.79
CDY55359 Canola extracellular, vacuole 57.24 62.36
VIT_07s0129g00490.t01 Wine grape extracellular 62.06 62.06
Solyc02g092680.1.1 Tomato extracellular 60.76 61.89
Bra037113.1-P Field mustard cytosol 58.15 61.77
Bra021614.1-P Field mustard extracellular 60.76 61.56
CDY63300 Canola extracellular 57.24 61.31
CDY29697 Canola extracellular 59.71 61.31
CDY18653 Canola extracellular, plasma membrane 57.11 61.09
CDY18654 Canola extracellular, plasma membrane 59.32 61.07
Bra037112.1-P Field mustard extracellular, plasma membrane 60.1 60.82
KRH52072 Soybean nucleus 60.89 60.73
CDY44380 Canola extracellular 54.37 60.61
Bra033113.1-P Field mustard extracellular 54.11 60.58
KRH61386 Soybean nucleus 60.63 60.39
CDY67452 Canola extracellular, plasma membrane 58.28 59.76
CDY18651 Canola extracellular, plasma membrane 58.28 59.52
Bra037115.1-P Field mustard extracellular, plasma membrane 59.19 59.27
CDY43568 Canola plastid 16.43 58.6
KRH05609 Soybean extracellular, vacuole 59.32 58.56
CDY66924 Canola cytosol 42.76 58.47
CDY63302 Canola extracellular, vacuole 56.45 57.89
KRH15432 Soybean nucleus 58.28 57.75
CDY22001 Canola extracellular, plasma membrane 55.15 57.63
KRH28401 Soybean extracellular 57.76 57.53
Bra036803.1-P Field mustard extracellular 41.46 57.09
Bra039051.1-P Field mustard extracellular, plasma membrane 54.5 56.95
CDY63219 Canola extracellular 55.15 56.93
KRH76515 Soybean extracellular 55.15 54.58
TraesCS2A01G398900.1 Wheat golgi 53.72 53.02
CDX80285 Canola cytosol, plastid 28.81 53.0
TraesCS7A01G211600.1 Wheat vacuole 52.8 52.73
TraesCS4A01G071500.1 Wheat extracellular, plasma membrane 51.24 50.26
TraesCS6A01G339400.1 Wheat extracellular, golgi 50.98 49.94
TraesCS6A01G337800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.33 49.11
TraesCS3A01G420500.1 Wheat extracellular, plasma membrane 49.54 48.91
TraesCS6A01G337900.1 Wheat extracellular 47.2 48.79
TraesCS4A01G407900.1 Wheat extracellular 49.8 48.05
TraesCS6A01G339100.1 Wheat extracellular, unclear 48.76 47.95
TraesCS6A01G339200.1 Wheat extracellular, unclear 48.89 47.83
TraesCS5A01G214200.1 Wheat mitochondrion 52.15 47.51
TraesCS6A01G036800.1 Wheat extracellular 48.5 47.27
TraesCS5A01G316000.1 Wheat extracellular 47.33 46.24
TraesCS3A01G284000.1 Wheat plasma membrane, vacuole 42.11 43.83
TraesCS3A01G283600.2 Wheat vacuole 44.2 43.57
TraesCS5A01G255900.1 Wheat extracellular, mitochondrion, vacuole 45.63 43.05
TraesCS6A01G161600.1 Wheat extracellular 43.68 42.62
TraesCS7A01G381400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.5 40.85
TraesCS2A01G037100.1 Wheat plasma membrane 41.2 40.67
TraesCS3A01G254900.1 Wheat vacuole 40.29 40.29
Protein Annotations
MapMan:19.4.2.1.1Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30GO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538InterPro:IPR036852InterPro:IPR037045InterPro:PA_domainPFAM:PF00082PFAM:PF02225
PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF469InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS4A01G237500EnsemblPlants:TraesCS4A01G237500.1TIGR:cd02120TIGR:cd04852
SEG:seg:::::
Description
No Description!
Coordinates
chr4A:-:546296550..546298853
Molecular Weight (calculated)
78497.5 Da
IEP (calculated)
5.957
GRAVY (calculated)
0.029
Length
767 amino acids
Sequence
(BLAST)
001: MDRMLMRLLL VVALAVAAAA AEQRATYIVH MAKSAMPAEY ADHGEWYGAS LRSVSTGGAP AAKMLYSYDT VLHGFSARLT EQEASDMAGM DGVLAVNPET
101: RYELHTTRTP EFLGLAGSEG LFPQSGTGGD VVVGVLDTGV WPESKSYDDA GLGEVPSSWK GACMAGADFN SSACNRKLVG ARFFNRGYEA AMGPMDTSRE
201: SRSPRDDDGH GTHTSSTAAG SAVADADLFG FASGTARGMA PKARVAVYKV CWLGGCFSSD ILAGMDAAVD DGCGVLSLSL GGGSADYSRD SVAIGAFAAM
301: EQNVVVSCSA GNAGPGSATL SNVAPWITTV GAGTLDRDFP AYVQLGNGKN YTGVSLYAGK APPSTPTPLV YAGNASNSTS GNLCMPGTLS PEKVQGKIVV
401: CDRGISARVQ KGFVVRDAGG AGMVLANTAA NGQELVADAH LLPATGVGEK EGAAIKSYIA SESKPTATIV VAGTQVDVRP SPLVAAFSSR GPNMITPEIL
501: KPDIIGPGVN ILAAWTGKAG PTGLAADTRR VNFNIISGTS MSCPHVSGLA ALLRSAHPEW SPAAVRSALM TTAYSTYTGG AGAPILDAAT GAAATPFDYG
601: AGHVDPTRAV EPGLVYDLGT SDYVDFLCAL KYTPNMIAAL ARNKTYGCAA NKTYAVANLN YPSFSVAYST ANGEAGDSGA TTVTHTRTLT NVGAAGTYKV
701: DASVSMSGVT VDVKPAELEF TAAGEKKSYT VSFTAAKSQP SGTAGFGRLV WSDGKHTVAS PIAITWT
Best Arabidopsis Sequence Match ( AT5G67360.1 )
(BLAST)
001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT
Arabidopsis Description
SBT1.7Subtilisin-like protease SBT1.7 [Source:UniProtKB/Swiss-Prot;Acc:O65351]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.