Factsheet for TraesCS2A01G398900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

golgi: 25769308
unclear: 25769308
nucleus: 26228564

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G416900.1	Wheat	extracellular, plasma membrane	97.68	97.56
TraesCS2D01G396400.1	Wheat	golgi	97.43	97.43
EES12694	Sorghum	extracellular, golgi, plasma membrane	87.0	87.0
Zm00001d026068_P001	Maize	mitochondrion	86.74	86.74
HORVU2Hr1G094670.1	Barley	extracellular	62.03	84.41
Os04t0573300-00	Rice	extracellular	81.08	71.19
GSMUA_Achr5P20160_001	Banana	extracellular	53.93	68.46
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	67.95	68.22
KRG91405	Soybean	nucleus	67.44	67.09
KRH35414	Soybean	nucleus	67.05	66.62
PGSC0003DMT400019555	Potato	endoplasmic reticulum, extracellular, golgi	65.38	65.72
Solyc03g006970.1.1	Tomato	nucleus	65.51	65.68
KRH09188	Soybean	nucleus	64.48	64.15
KRH38672	Soybean	nucleus	63.71	63.79
CDY00497	Canola	extracellular, plasma membrane	63.58	63.74
Bra028274.1-P	Field mustard	extracellular, plasma membrane	63.45	63.61
AT5G51750.1	Thale cress	extracellular, plasma membrane, vacuole	63.71	63.46
CDX99895	Canola	extracellular, plasma membrane	63.06	63.23
KRH62506	Soybean	extracellular	49.94	58.97
TraesCS5A01G399800.1	Wheat	golgi	53.28	54.12
TraesCS4A01G237500.1	Wheat	unclear	53.02	53.72
TraesCS7A01G211600.1	Wheat	vacuole	50.84	51.43
TraesCS4A01G071500.1	Wheat	extracellular, plasma membrane	50.06	49.74
TraesCS3A01G420500.1	Wheat	extracellular, plasma membrane	49.03	49.03
TraesCS6A01G339400.1	Wheat	extracellular, golgi	46.72	46.36
TraesCS6A01G337900.1	Wheat	extracellular	42.86	44.88
TraesCS5A01G214200.1	Wheat	mitochondrion	48.39	44.66
TraesCS6A01G339100.1	Wheat	extracellular, unclear	44.79	44.62
TraesCS6A01G337800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.05	44.53
TraesCS6A01G339200.1	Wheat	extracellular, unclear	44.27	43.88
TraesCS6A01G036800.1	Wheat	extracellular	43.76	43.2
TraesCS5A01G316000.1	Wheat	extracellular	43.37	42.93
TraesCS4A01G407900.1	Wheat	extracellular	43.89	42.89
TraesCS6A01G161600.1	Wheat	extracellular	41.96	41.48
TraesCS3A01G284000.1	Wheat	plasma membrane, vacuole	39.0	41.11
TraesCS5A01G255900.1	Wheat	extracellular, mitochondrion, vacuole	42.73	40.84
TraesCS3A01G283600.2	Wheat	vacuole	40.8	40.75
TraesCS3A01G254900.1	Wheat	vacuole	39.38	39.9
TraesCS7A01G381400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.9	38.85
TraesCS2A01G037100.1	Wheat	plasma membrane	38.48	38.48

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PFscan:PS51257	PANTHER:PTHR10795	PANTHER:PTHR10795:SF322
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2A01G398900	EnsemblPlants:TraesCS2A01G398900.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:652288362..652290695

Molecular Weight (calculated)

81903.2 Da

IEP (calculated)

7.725

GRAVY (calculated)

-0.069

Length

777 amino acids

Sequence
(BLAST)

001: MDPRGARWTA PSLCMALVLL QASISACAGA PKTYIVQMAA SEKPSSFDFH HEWYASTVKS VSSAQVEAEE EDGAYARIVY NYETAFHGFA ARLDEDEAER
101: MAEAAGVLAV LPETVLQLHT TRSPDFLGIG PEVSNRIWAA GLADHDVVVG VLDTGIWPES PSFSDKGLGP VPAKWKGLCQ TGRGFTTADC NRKIIGARIF
201: YNGYEASSGP INETTELKSP RDQDGHGTHT AATAAGSPVP DAGLFGYARG VARGMAPRAR VAAYKVCWTG GCFSSDILAA VDRAVSDGVD VLSISLGGGA
301: SPYYRDSLSI ASFGAMQMGV FIACSAGNAG PDPISLTNLS PWITTVGAST MDRDFPATVT LGNGANITGV SLYKGRKNLS PRQQYPVVYM GGNSSVPNPR
401: SMCLEGTLEP NAVAGKIVIC DRGISPRVQK GQVVKEAGGI GMILANTAAN GEELVADSHL LPAVAVGESE GVAAKKYTRT APKPTATLSF AGTKLGIRPS
501: PVVAAFSSRG PNYLTLEILK PDLIAPGVNI LAAWSGDASP SSLASDRRRV GFNILSGTSM SCPHVAGVAA LLKASHPDWS PAQIKSALMT TAYVHDNTYR
601: VLKDAATGDA STPFEHGAGH IHPVRALNPG LVYDIGQNEY LEFLCTQNLT TTQLKGFTKN SNMTCKGSFS SPGDLNYPAI SAVFTDQPAT PLTVRRTVTN
701: VGPPSSTYHV KVTKFKGADV VVEPSTLHFS SANQKLAYKV TVRTKAAQKT PEYGALSWSD GVHVVRSPLV LTWLPPM

Best Arabidopsis Sequence Match ( AT5G51750.1 )
(BLAST)

001: MANKNPLQKP FLFIILSINL IFLQAETTTQ ISTKKTYVIH MDKSAMPLPY TNHLQWYSSK INSVTQHKSQ EEEGNNNRIL YTYQTAFHGL AAQLTQEEAE
101: RLEEEDGVVA VIPETRYELH TTRSPTFLGL ERQESERVWA ERVTDHDVVV GVLDTGIWPE SESFNDTGMS PVPATWRGAC ETGKRFLKRN CNRKIVGARV
201: FYRGYEAATG KIDEELEYKS PRDRDGHGTH TAATVAGSPV KGANLFGFAY GTARGMAQKA RVAAYKVCWV GGCFSSDILS AVDQAVADGV QVLSISLGGG
301: VSTYSRDSLS IATFGAMEMG VFVSCSAGNG GPDPISLTNV SPWITTVGAS TMDRDFPATV KIGTMRTFKG VSLYKGRTVL PKNKQYPLVY LGRNASSPDP
401: TSFCLDGALD RRHVAGKIVI CDRGVTPRVQ KGQVVKRAGG IGMVLTNTAT NGEELVADSH MLPAVAVGEK EGKLIKQYAM TSKKATASLE ILGTRIGIKP
501: SPVVAAFSSR GPNFLSLEIL KPDLLAPGVN ILAAWTGDMA PSSLSSDPRR VKFNILSGTS MSCPHVSGVA ALIKSRHPDW SPAAIKSALM TTAYVHDNMF
601: KPLTDASGAA PSSPYDHGAG HIDPLRATDP GLVYDIGPQE YFEFLCTQDL SPSQLKVFTK HSNRTCKHTL AKNPGNLNYP AISALFPENT HVKAMTLRRT
701: VTNVGPHISS YKVSVSPFKG ASVTVQPKTL NFTSKHQKLS YTVTFRTRFR MKRPEFGGLV WKSTTHKVRS PVIITWLPPL

Arabidopsis Description

SBT1.3Subtilisin-like protease SBT1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.