Factsheet for VIT_00s0454g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0454g00010.t01	Wine grape	extracellular	63.8	71.31
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	52.12	52.86
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	36.46	49.48
VIT_10s0003g02220.t01	Wine grape	nucleus	40.69	41.01
VIT_07s0129g00490.t01	Wine grape	extracellular	38.9	39.5
VIT_03s0038g02230.t01	Wine grape	extracellular	39.15	39.41
VIT_18s0001g09360.t01	Wine grape	extracellular	38.38	39.09
VIT_09s0002g01040.t01	Wine grape	extracellular	37.61	38.0
VIT_07s0005g00830.t01	Wine grape	extracellular, plasma membrane	35.43	37.3
VIT_15s0048g01120.t01	Wine grape	cytosol	35.82	36.9
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	36.2	36.43
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	35.56	36.4
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	36.33	35.91
VIT_15s0048g01180.t01	Wine grape	extracellular	34.27	34.81
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	34.02	34.6
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	35.56	33.41
VIT_00s0454g00030.t01	Wine grape	extracellular, plasma membrane	73.43	30.7
VIT_15s0048g01170.t01	Wine grape	cytosol	36.07	19.08

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	ProteinID:CCB61097.1
ncoils:Coil	UniProt:F6I2D0	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045
InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	PANTHER:PTHR10795
PANTHER:PTHR10795:SF523	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_subtilisin-rel	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	UniParc:UPI000210863E	ArrayExpress:VIT_00s0454g00040	EnsemblPlantsGene:VIT_00s0454g00040	EnsemblPlants:VIT_00s0454g00040.t01	SEG:seg

Description

Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6I2D0]

Coordinates

chrUn:+:29498296..29502089

Molecular Weight (calculated)

81659.1 Da

IEP (calculated)

7.379

GRAVY (calculated)

-0.158

Length

779 amino acids

Sequence
(BLAST)

001: MSCDFFPLFL ESYVVYLGGH SHGAQPPSAS DFSRITDSHH DLLGSCMSSK KKAREAIFYS YTRYINGFAA VLEDEEAAEL SKKPGVVSVF LNQKNELHTT
101: RSWEFLGLER NGEIPADSIW TKGKFGEDII IGNLDTGVWP ESESFNDQGI GPIPSKWKGY CETNDGVKCN RKLIGARYFN KGYEQPWGNR SFFLPXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE QTCWSVPNPT NTSSFFKNKF HKIGIFTPFQ LILLLTKDTK DFLKYLENSQ IPTDAAIHDG VDVLSPSLGF
301: PRGYFLDSVA VGSFQAVKNG IVVVCSAGNS GPTPGSVEIS APWIITVAAS TIDRDSPSYV MLGNNRQFKG LSFYTNSLPA EKFYPLVYSV DARAPNASAR
401: DAQLCFVGSL DPEKVKGKIV YCLVGLNAIV EKSWVVAQAG GIGMIIANRL STGAIIHRAH FVPTSHVSAA DGLSILLYIH TTKYPVDYIR GATEVGTVVA
501: PIMASTSAQG PNPIAPEILK PDITARGVNI LAAYTEAKGP TDLQSDDRRL PFHIVSGTSM SCPHVSRIVG LLKKIHPEWS PSAIRSAIMT TGQTRSNVRQ
601: PLANDTLAEV NPFNYGAGHL WPNRAMDPGL VYDLTTIDYL NFLCSIGYNA TQPLKFVDKP YECPPKPLSS WDLNYPSITV PSLSGKVTVT WTLKNVGSPA
701: TYTVRTEVPS GTEVPSGISV KVEPNRLKFE KINEEKTFKV TLEAKRDGED GGYVFGRLIW TDGEHYVRSP IVVNATTLQ

Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)

001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

Arabidopsis Description

AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.