Factsheet for VIT_00s0454g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0454g00010.t01	Wine grape	extracellular	33.49	89.53
VIT_00s0454g00040.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.7	73.43
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	24.96	60.55
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	17.28	56.1
VIT_10s0003g02220.t01	Wine grape	nucleus	19.32	46.57
VIT_03s0038g02230.t01	Wine grape	extracellular	18.14	43.67
VIT_07s0129g00490.t01	Wine grape	extracellular	17.93	43.55
VIT_18s0001g09360.t01	Wine grape	extracellular	17.61	42.88
VIT_09s0002g01040.t01	Wine grape	extracellular	17.39	42.02
VIT_15s0048g01120.t01	Wine grape	cytosol	16.75	41.27
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	16.64	40.74
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	17.18	40.61
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	16.75	40.31
VIT_15s0048g01180.t01	Wine grape	extracellular	16.59	40.29
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	16.16	39.3
VIT_07s0005g00830.t01	Wine grape	extracellular, plasma membrane	15.19	38.24
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	16.8	37.76
VIT_15s0048g01170.t01	Wine grape	cytosol	17.28	21.86

Protein Annotations

EntrezGene:100254828	wikigene:100254828	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CCB61096	ProteinID:CCB61096.1	UniProt:F6I2C9	EMBL:FN596545	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100254828	wikigene:LOC100254828	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF523	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.A26	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	UniParc:UPI000210863D
ArrayExpress:VIT_00s0454g00030	EnsemblPlantsGene:VIT_00s0454g00030	EnsemblPlants:VIT_00s0454g00030.t01	RefSeq:XP_002269259	RefSeq:XP_002269259.2	SEG:seg

Description

No Description!

Coordinates

chrUn:+:29482501..29494713

Molecular Weight (calculated)

200560.0 Da

IEP (calculated)

8.340

GRAVY (calculated)

-0.063

Length

1863 amino acids

Sequence
(BLAST)

0001: MGIMNLPLFL LSFILFYVMQ CPTLALKRSY VVYLGGHSHG SQRTSEMDLN RITDSHHDLL GSCLGSKEKA QESIFYSYTH HINGFAANLE DEEAAELSKR
0101: PGVVSIFLNQ KHKLQTTRSW EFLGLERNGE IPADSIWVKA RFGEDIIIGN IDTGVWPESE SFNDQGMGPI PSKWKGYCEP NDDVKCNRKL IGARYFNRGV
0201: EAKLGSPLNS SYQTVRDTNG HGTHTLSTAG GRFVGGANLL GSGYGTAKGG SPSARVASYK SCWPDCNDAD VLAAIDAAIH DGVDILSLSI AFVSRDYFLD
0301: SIAIGSLHAV QNGIVVVCAG GNSGPTPGSV TNSAPWIITV AASTIDREFP SNVMLGNNKQ FKGLSFKTNS LTAEKFYPLV YSVDARAANA SARDAQLCSV
0401: GSLDPKKVKG KIVYCLVDPS GLNALNVEKS WVVAQAGGIG MILANHLTTA TLIPQAHFVP TSRVSAADGL AILLYIHTTK YPVAYISGAT EVGTVTAPIM
0501: ASFSSQGPNT ITPEILKPDI TAPGVQIIAA YTEARGPTFL QSDHRRVLFN ILSGTSMSCP HVSGAVGLLK KIHPNWSPSA IRSAIMTSAR TRSNLRQPIA
0601: NGTLAGGNPF NYGAGHLSPN RAMDPGLVYD LTITDYLNFL CSIGYNATQL STFVDKKYEC PSKPTRPWDL NYPSITVPSL SGKVTVTRTL KNVGTPATYT
0701: VRIKAPSGIS VKVEPKRLRF EKINEEKMFK VTIEAKRDDG GGEYVFGRLI WSDGKHFVGS PIVVNATTFH IQLCSVGSLD PKKVKGKIVY CLVGLNAIVE
0801: KSWVVAQAGG VGMILANHLT TTALIAQAHF VPTSHVSAAD GLAILLYIQT TKYPVAYISG ATEVGTVPAP IMATFSSQGP NLITPEILKP DITAPGVRIL
0901: AAYTEANGPT GLQSDDRRVP FNIGSGTSMS CPRVAGTVGL LKKIHPHWSP SAIRSAIVTT ARTRNNLRQP MANGTLSEAN PFNYGAGYLS PNRAMDPGLV
1001: YDLTTTDYLN FLCSIGYNAT QLSSLSGKVT VTRTLKNVGT PATYTVQTEV PSGISLKVEP NTLKFQKINE EKTFKVPLEA KRDGEGGEYV FGRLIWSDGE
1101: HYVRSSIVVN ATTMLLIELY VTSSSYVVYL GSHSHGVEPT SSLHFSKITD SYYDLLGSCM GSKKKAQEAI FYSYTSYING FAAVLEDEEA AELSKQPGVL
1201: SVFLNQKNEL HTTRSWEFLG LERNGEIPAN SIWVKARFGE EIIIGNLDTG VWSESDSFND KGMEPIPSKW KGYCEPSDGV KCNRKLVGAR YFNKGYEAAL
1301: GKPLDSSYQT ARDTNGHGTH TLSTAGGGFV GGANLLGSGY GTAKGGSPSA RVASYKVCWP SCYDADILAA FDAAIHDGVD VLSVSLGGPP RDYFLDSIAI
1401: GSFQAVKKGI VVVCSAGNSG PTPGSVENSA PWIITVAAST IDRDFPSYVM LGNNLQFKGL SFYTNSLPAA KFYPLVYSVD ARAPNASARE AQLCFVGSLD
1501: PEKVKGKIVY CLIGLNEIVQ KSWVVAQAGG IGMILANRLS TSTLIPQAHF VPTSYVSAAD GLAILLYIHI TKYPVAYIRG ATEVGTVAAP IMASFSSQGP
1601: NTITPGILNP DITAPGVNIL AAYIEAKGPT FLQSDDRRVL FNIVSGTSMS CPQVSGTVGL LKKIHPHWSP SAIRSAIMTT ARTRNNVRQP MANGTLEEAN
1701: PFNYGAGHLW PNRAMDPGLV YDLTTIDYLN FLCSIGYNAT QLSRFVDEPY ESPPNPMSVL DLNYPSITVP SFSGKVTVTR TLKNVGTPAT YAVRTEVPSE
1801: LLVKVEPERL KFEKINEEKT FKVTLEAKRD GEGSGYIFGR LIWSDGEHYV RSPIVVNATT LHM

Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)

001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

Arabidopsis Description

AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.