CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044042_P001	Maize	extracellular, mitochondrion, plastid	69.5	98.53
Os01t0649100-01	Rice	mitochondrion	65.98	93.53
EES19985	Sorghum	mitochondrion	63.69	90.29
HORVU3Hr1G058460.1	Barley	mitochondrion	63.07	89.15
TraesCS3D01G236200.1	Wheat	mitochondrion	62.24	88.24
TraesCS3B01G265000.1	Wheat	golgi, mitochondrion, unclear	62.03	87.94
TraesCS3A01G234800.2	Wheat	mitochondrion	61.2	86.76
KRH55117	Soybean	mitochondrion	59.75	83.48
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	59.96	83.05
GSMUA_Achr4P08580_001	Banana	mitochondrion	59.75	83.0
Solyc07g062650.2.1	Tomato	extracellular	59.54	82.95
KRH26205	Soybean	mitochondrion	59.34	82.9
Solyc12g014180.1.1	Tomato	mitochondrion, unclear	58.71	82.75
PGSC0003DMT400039788	Potato	mitochondrion	58.3	82.4
Bra038112.1-P	Field mustard	mitochondrion	53.32	82.37
PGSC0003DMT400032266	Potato	cytosol, extracellular	59.13	82.37
VIT_10s0003g01000.t01	Wine grape	mitochondrion	59.54	81.53
CDY59402	Canola	mitochondrion	57.47	81.23
AT3G15020.1	Thale cress	mitochondrion	57.47	81.23
Bra030951.1-P	Field mustard	mitochondrion	57.47	81.23
CDY25868	Canola	mitochondrion	57.47	81.23
CDY55845	Canola	mitochondrion	57.26	80.94
CDY02518	Canola	mitochondrion	57.26	80.94
CDY24107	Canola	mitochondrion	57.05	80.88
CDY26002	Canola	mitochondrion	57.47	80.76
VIT_19s0014g01640.t01	Wine grape	mitochondrion	57.88	80.4
AT1G53240.1	Thale cress	mitochondrion	56.85	80.35
Bra039662.1-P	Field mustard	mitochondrion	56.64	80.29
CDY55842	Canola	mitochondrion	21.58	77.04
OQU80513	Sorghum	plastid	43.36	53.05
OQU90313	Sorghum	plastid	42.53	52.84
KXG37460	Sorghum	mitochondrion	46.89	51.13
KXG24112	Sorghum	plastid	46.68	50.45

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:2.3.8	Gene3D:3.40.50.720	Gene3D:3.90.110.10	UniProt:A0A1B6Q515	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616
GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	EnsemblPlants:KXG33002	ProteinID:KXG33002	ProteinID:KXG33002.1
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF45	MetaCyc:PWY-1622
MetaCyc:PWY-5392	MetaCyc:PWY-561	MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728	MetaCyc:PWY-6969
MetaCyc:PWY-7115	MetaCyc:PWY-7383	EnsemblPlantsGene:SORBI_3003G238500	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772
UniParc:UPI00081AD8E4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:57798790..57804310

Molecular Weight (calculated)

51760.3 Da

IEP (calculated)

10.214

GRAVY (calculated)

-0.327

Length

482 amino acids

Sequence
(BLAST)

001: MEDTVAEKKP RTAGDRDGDG CNGEPSGTAE SGGLAPDWWR GSPRRCWWRC WPSRPRRRLL RRCVLPLAPR RRQRRPLRPR PVHELHPLKK KVLKPKQRPE
101: IPLRFHPIPS HPTSSTPPVP LSPSSSDPRS QAPPQNPSPN STMRPSLLRS TSQLLRRRSY SSASGQPERK VAILGAAGGI GQPLSLLMKL NPLVSSLSLY
201: DIAGTPGVAA DVSHINSPAL VKGFMGEEQL GEALEGSDVV IIPAGVPRKP GMTRDDLFNI NAGIVKNLSA AIAKYCPNAL VNMISNPVNS TVPIAAEVFK
301: KAGTYDEKKL FGVTTLDVVR AKTFYAGKAN LPVTDVNVPV VGGHAGITIL PLFSQATPAT NSLSDEDIKA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG
401: AVFADACLKG LNGVPDIVEC SFVQSTVTEL PFFASKVRLG KNGVEEVLGL GELSDFEKEG LEKLKSELKS SIEKGIKFAN EN

Best Arabidopsis Sequence Match ( AT3G15020.1 )
(BLAST)

001: MFRSMIVRSA SPVKQGLLRR GFASESVPDR KVVILGAAGG IGQPLSLLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS QVSGYMGDDD LGKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLS IAIAKYCPQA LVNMISNPVN STVPIAAEIF KKAGTYDEKK LFGVTTLDVV RARTFYAGKS DVNVAEVNVP
201: VVGGHAGITI LPLFSQASPQ ANLSDDLIRA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPNVVEC SFVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKAELKS SIEKGIKFAN Q

Arabidopsis Description

mMDH2Malate dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.