Factsheet for HORVU3Hr1G058460.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G236200.1	Wheat	mitochondrion	96.77	97.06
TraesCS3B01G265000.1	Wheat	golgi, mitochondrion, unclear	96.48	96.76
TraesCS3A01G234800.2	Wheat	mitochondrion	95.31	95.59
Zm00001d044042_P001	Maize	extracellular, mitochondrion, plastid	90.32	90.59
Os01t0649100-01	Rice	mitochondrion	89.74	90.0
Bra030951.1-P	Field mustard	mitochondrion	81.52	81.52
AT1G53240.1	Thale cress	mitochondrion	81.23	81.23
CDY59402	Canola	mitochondrion	81.23	81.23
CDY02518	Canola	mitochondrion	80.94	80.94
Bra038112.1-P	Field mustard	mitochondrion	73.9	80.77
CDY25868	Canola	mitochondrion	80.65	80.65
CDY24107	Canola	mitochondrion	80.35	80.59
CDY26002	Canola	mitochondrion	80.94	80.47
CDY55845	Canola	mitochondrion	80.35	80.35
KRH55117	Soybean	mitochondrion	81.23	80.29
Solyc12g014180.1.1	Tomato	mitochondrion, unclear	80.35	80.12
PGSC0003DMT400039788	Potato	mitochondrion	80.06	80.06
Bra039662.1-P	Field mustard	mitochondrion	79.77	80.0
KRH26205	Soybean	mitochondrion	80.65	79.71
AT3G15020.1	Thale cress	mitochondrion	79.18	79.18
VIT_10s0003g01000.t01	Wine grape	mitochondrion	81.52	78.98
PGSC0003DMT400032266	Potato	cytosol, extracellular	80.06	78.9
Solyc07g062650.2.1	Tomato	extracellular	80.06	78.9
GSMUA_Achr4P08580_001	Banana	mitochondrion	79.77	78.39
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	79.47	77.87
VIT_19s0014g01640.t01	Wine grape	mitochondrion	77.71	76.37
CDY55842	Canola	mitochondrion	29.91	75.56
KXG33002	Sorghum	cytosol, nucleus, peroxisome	89.15	63.07
HORVU5Hr1G098890.10	Barley	plastid	63.34	59.83
HORVU1Hr1G090710.1	Barley	cytosol	67.45	57.64
HORVU5Hr1G002010.1	Barley	plastid	66.28	55.26
HORVU1Hr1G081550.1	Barley	plastid	60.41	51.63
HORVU7Hr1G091760.2	Barley	mitochondrion	60.7	44.61
HORVU1Hr1G090720.1	Barley	peroxisome	15.84	25.59
HORVU5Hr1G020370.1	Barley	cytosol	0.0	0.0

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:2.3.8	Gene3D:3.40.50.720	Gene3D:3.90.110.10	UniProt:A0A287L779	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0019752
GO:GO:0030060	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G058460	EnsemblPlants:HORVU3Hr1G058460.1	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF45
SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI000B466125	SEG:seg	:

Description

Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287L779]

Coordinates

chrchr3H:-:441092714..441096068

Molecular Weight (calculated)

35548.1 Da

IEP (calculated)

8.292

GRAVY (calculated)

0.145

Length

341 amino acids

Sequence
(BLAST)

001: MRPSVMRSAA QLLRRRSYSS ASGQQERKVA ILGAAGGIGQ PLSLLMKLNP LVSSLSLYDI AATPGVAADV SHINSPALAK GFMGDDQLAE ALDGADLVII
101: PAGVPRKPGM TRDDLFNINA GIVKNLCTAI AKYCPNALVN MISNPVNSTV PIAAEVFKKA GTYDEKRLFG VTTLDVVRAR TFYAGKANVP VNAVDVPVVG
201: GHAGITILPL FSQATPSTNA LSAEEIKALT KRTQDGGTEV VEAKAGKGSA TLSMAYAGAV FGDACLKGLN GVPDIVECSY VQSTVTELPF FASKVRLGKN
301: GVEEVLGLGQ LTEFEKEGLE ALKGELKSSI EKGVAFANLV P

Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)

001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Arabidopsis Description

mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.