Factsheet for HORVU7Hr1G091760.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G289400.1	Wheat	plastid	82.11	96.7
TraesCS7A01G386600.1	Wheat	plastid	81.25	95.69
TraesCS7D01G383100.1	Wheat	plastid, vacuole	83.41	93.25
Os08t0434300-01	Rice	plastid	70.47	91.85
HORVU1Hr1G081550.1	Barley	plastid	78.66	91.48
Solyc09g091070.1.1	Tomato	nucleus	55.82	86.91
Os01t0829800-01	Rice	plastid	73.06	85.61
OQU80513	Sorghum	plastid	71.77	84.52
Zm00001d032187_P001	Maize	plastid	71.12	83.76
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	71.34	83.38
GSMUA_Achr6P02650_001	Banana	plastid	66.81	74.52
GSMUA_Achr5P23320_001	Banana	peroxisome	50.22	74.2
VIT_17s0000g06270.t01	Wine grape	plastid	64.87	72.88
PGSC0003DMT400030247	Potato	plastid	64.66	72.82
PGSC0003DMT400065411	Potato	plastid	64.66	72.82
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.78	72.33
PGSC0003DMT400050235	Potato	plastid	64.01	72.09
AT3G47520.1	Thale cress	plastid	62.5	71.96
KRH56907	Soybean	endoplasmic reticulum	64.01	71.91
KRH03482	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	63.36	71.88
GSMUA_Achr7P11540_001	Banana	plastid	64.44	71.88
Solyc03g115990.1.1	Tomato	plastid	63.79	71.84
CDY21789	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.57	71.7
CDY61271	Canola	plastid	61.64	71.5
VIT_14s0108g00870.t01	Wine grape	plastid	65.73	71.26
Bra018137.1-P	Field mustard	plastid	61.21	70.65
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	53.66	66.58
CDY47402	Canola	plastid	62.07	61.28
HORVU3Hr1G058460.1	Barley	mitochondrion	44.61	60.7
HORVU5Hr1G098890.10	Barley	plastid	42.89	55.12
CDX98040	Canola	cytosol	18.97	52.69
HORVU5Hr1G002010.1	Barley	plastid	45.26	51.34
CDY19424	Canola	cytosol	17.67	48.24
CDX77861	Canola	plastid	27.59	44.76
AT3G53910.1	Thale cress	cytosol	10.34	44.44
HORVU1Hr1G090710.1	Barley	cytosol	34.27	39.85
Bra019790.1-P	Field mustard	plastid	32.33	38.36
HORVU1Hr1G090720.1	Barley	peroxisome	10.13	22.27
HORVU5Hr1G020370.1	Barley	cytosol	0.65	2.97

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0030060	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G091760	EnsemblPlants:HORVU7Hr1G091760.2
InterPro:IPR015955	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	UniProt:M0UNQ9	InterPro:Malate_DH_type1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056	PFAM:PF02866	PANTHER:PTHR11540	PANTHER:PTHR11540:SF46	SUPFAM:SSF51735
SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI000295ED5F	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:560892598..560894706

Molecular Weight (calculated)

48303.4 Da

IEP (calculated)

9.115

GRAVY (calculated)

0.101

Length

464 amino acids

Sequence
(BLAST)

001: MQPRLGIGQR LVAHSVPCHT SASPPPPRSR LSGTRTAVSL LPRPPAHPAA ASTQPVSGHL GLLPSLELDM ASSSATISSL GAQAALVSKP KNHGISGTKA
101: SSSISFGLGS SFLGKTASLR ASVTTRFAPK AKPVARILPE ASYKVAVLGA AGGIGQPLGL LIKMSPLVSE LRLYDIANVK GVAADLSHCN TPSQVMDFTG
201: PAELASCLKG VDVVVIPAGV PRKPGMTRDD LFNINAGIVK SLIEAVADNC PEAFIHIISN PVNSTVPIAA EILKQKGVYN PKKLFGVSTL DVVRANTFVA
301: QKKGLKLIDV DVPVVGGHAG ITILPLLSKT RPSVTFTDEE TEELTKRIQN AGTEVVEAKA GAGSATLSMA YAAARFVESS LRALAGDPDV YECTYVQSEL
401: TELPFFASRV KLGKNGVESI ISSDLEGLTE YEANALEALK PELKASIEKG IEFAHKQQGA AASV

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.