Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plasma membrane, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU80513 Sorghum plastid 92.95 93.65
Os08t0434300-01 Rice plastid 83.88 93.54
Zm00001d032187_P001 Maize plastid 90.18 90.86
Solyc09g091070.1.1 Tomato nucleus 65.49 87.25
Os01t0829800-01 Rice plastid 86.65 86.87
TraesCS1D01G351500.1 Wheat golgi, plastid 84.63 84.42
TraesCS1A01G348500.1 Wheat plastid 84.63 84.42
TraesCS1B01G363100.1 Wheat plastid 84.38 84.17
TraesCS7B01G289400.1 Wheat plastid 83.38 84.01
TraesCS7A01G386600.1 Wheat plastid 83.38 84.01
HORVU1Hr1G081550.1 Barley plastid 83.88 83.46
TraesCS7D01G383100.1 Wheat plastid, vacuole 83.38 79.76
GSMUA_Achr6P02650_001 Banana plastid 79.09 75.48
Bra019504.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 29.97 74.84
AT3G47520.1 Thale cress plastid 75.57 74.44
CDY21789 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 29.72 74.21
GSMUA_Achr5P23320_001 Banana peroxisome 58.69 74.2
GSMUA_Achr7P11540_001 Banana plastid 77.08 73.56
Solyc03g115990.1.1 Tomato plastid 76.07 73.3
VIT_17s0000g06270.t01 Wine grape plastid 76.07 73.12
PGSC0003DMT400030247 Potato plastid 75.82 73.06
PGSC0003DMT400050235 Potato plastid 75.82 73.06
PGSC0003DMT400065411 Potato plastid 75.82 73.06
CDY61271 Canola plastid 73.55 73.0
KRH03482 Soybean endoplasmic reticulum, mitochondrion, nucleus, plastid 74.56 72.37
Bra018137.1-P Field mustard plastid 72.8 71.89
KRH56907 Soybean endoplasmic reticulum 74.56 71.67
HORVU7Hr1G091760.2 Barley mitochondrion 83.38 71.34
VIT_14s0108g00870.t01 Wine grape plastid 76.83 71.26
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 62.72 66.58
CDY47402 Canola plastid 73.3 61.91
Zm00001d044042_P001 Maize extracellular, mitochondrion, plastid 52.9 61.76
Zm00001d039089_P001 Maize mitochondrion 52.14 60.88
Zm00001d022229_P001 Maize plastid 57.68 59.64
Zm00001d041243_P001 Maize mitochondrion 51.13 56.39
Zm00001d009640_P002 Maize mitochondrion, plasma membrane 51.64 55.71
Zm00001d034241_P001 Maize extracellular, plastid 49.87 55.31
CDX98040 Canola cytosol 21.66 51.5
CDY19424 Canola cytosol 19.9 46.47
CDX77861 Canola plastid 32.75 45.45
AT3G53910.1 Thale cress cytosol 12.09 44.44
Bra019790.1-P Field mustard plastid 37.03 37.6
Protein Annotations
KEGG:00020+1.1.1.37KEGG:00270+1.1.1.37KEGG:00620+1.1.1.37KEGG:00630+1.1.1.37KEGG:00680+1.1.1.37KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37EntrezGene:100193663MapMan:23.1.3.4.3Gene3D:3.40.50.720Gene3D:3.90.110.10ProteinID:AQK52494.1
UniProt:B4FFV3EMBL:BT035991EMBL:BT066697GO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0006091GO:GO:0006099GO:GO:0006108GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016491GO:GO:0016615GO:GO:0016616GO:GO:0019752GO:GO:0030060GO:GO:0055114
InterPro:IPR015955InterPro:L-lactate/malate_DHInterPro:Lactate/malate_DH_CInterPro:Lactate/malate_DH_NInterPro:Lactate_DH/Glyco_Ohase_4_CInterPro:Malate_DH_AS
InterPro:Malate_DH_type1InterPro:NAD(P)-bd_dom_sfPFAM:PF00056PFAM:PF02866PIRSF:PIRSF000102ScanProsite:PS00068
PANTHER:PTHR11540PANTHER:PTHR11540:SF46SUPFAM:SSF51735SUPFAM:SSF56327TIGRFAMs:TIGR01772UniParc:UPI00017B6933
EnsemblPlantsGene:Zm00001d050409EnsemblPlants:Zm00001d050409_P001EnsemblPlants:Zm00001d050409_T001SEG:seg::
Description
Malate dehydrogenase
Coordinates
chr4:+:86577059..86578252
Molecular Weight (calculated)
41619.3 Da
IEP (calculated)
8.296
GRAVY (calculated)
0.157
Length
397 amino acids
Sequence
(BLAST)
001: MASTVTFNPV SAQAALIQKP RNLGAISYAG LKMPASVSSG SESSFLGWNA SLRAAVTPRI VPKTKSGSQI SPQASYKVAV LGAAGGIGQP LGLLVKMSPL
101: VSELHLYDIA NVKGVAADLS HCNTPAQVLD FTGPSELANC LKGVDVVVIP AGVPRKPGMT RDDLFNINAS IVKTLVEAVA DSCPEAFIHI ISNPVNSTVP
201: IAAEVLKQKG VYNPKKLFGV TTLDVVRANT FVAQKKNLKL IDVDVPVVGG HAGITILPLL SKTRPSVTFT DEETEELTKR IQNAGTEVVD AKAGAGSATL
301: SMAYAAARFV ESSLRALAGD PDVYECTFVQ SEITDLPFFA SRVKLGKNGV ESVISADLQG MTEYEAKALE ALKAELKASI EKGIAFVNKQ REAAASV
Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)
001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN
Arabidopsis Description
MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.