Factsheet for Zm00001d009640_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039089_P001	Maize	mitochondrion	90.22	97.65
EES19985	Sorghum	mitochondrion	88.86	96.18
Zm00001d044042_P001	Maize	extracellular, mitochondrion, plastid	84.24	91.18
Os05t0574400-01	Rice	extracellular	83.15	90.0
TraesCS1B01G443200.1	Wheat	extracellular, mitochondrion	81.52	87.98
TraesCS1A01G412900.1	Wheat	plastid	81.52	87.98
TraesCS1D01G420500.1	Wheat	mitochondrion	81.25	87.68
PGSC0003DMT400032266	Potato	cytosol, extracellular	78.53	83.53
Solyc07g062650.2.1	Tomato	extracellular	78.26	83.24
KRH55117	Soybean	mitochondrion	77.72	82.9
VIT_10s0003g01000.t01	Wine grape	mitochondrion	78.8	82.39
KRH26205	Soybean	mitochondrion	77.17	82.32
PGSC0003DMT400039788	Potato	mitochondrion	76.09	82.11
GSMUA_Achr4P08580_001	Banana	mitochondrion	77.17	81.84
Solyc12g014180.1.1	Tomato	mitochondrion, unclear	75.82	81.58
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	76.63	81.03
Bra038112.1-P	Field mustard	mitochondrion	68.21	80.45
AT3G15020.1	Thale cress	mitochondrion	74.46	80.35
CDY59402	Canola	mitochondrion	74.46	80.35
Bra030951.1-P	Field mustard	mitochondrion	74.46	80.35
CDY25868	Canola	mitochondrion	74.18	80.06
CDY02518	Canola	mitochondrion	74.18	80.06
CDY24107	Canola	mitochondrion	73.91	80.0
VIT_19s0014g01640.t01	Wine grape	mitochondrion	75.27	79.83
AT1G53240.1	Thale cress	mitochondrion	73.91	79.77
CDY55845	Canola	mitochondrion	73.91	79.77
Bra039662.1-P	Field mustard	mitochondrion	73.37	79.41
CDY26002	Canola	mitochondrion	73.91	79.3
CDY55842	Canola	mitochondrion	27.72	75.56
Zm00001d034241_P001	Maize	extracellular, plastid	60.6	62.29
Zm00001d041243_P001	Maize	mitochondrion	60.33	61.67
HORVU1Hr1G090710.1	Barley	cytosol	64.95	59.9
Zm00001d050409_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	55.71	51.64
Zm00001d032187_P001	Maize	plastid	54.62	51.02
Zm00001d022229_P001	Maize	plastid	50.82	48.7
HORVU1Hr1G090720.1	Barley	peroxisome	15.22	26.54

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	Gene3D:3.40.50.720	Gene3D:3.90.110.10	MapMan:35.1	UniProt:A0A1D6FKV9	ProteinID:AQK92333.1
ProteinID:AQK92334.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099
GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615
GO:GO:0016616	GO:GO:0019752	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF45
SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI00084519D4	EnsemblPlantsGene:Zm00001d009640	EnsemblPlants:Zm00001d009640_P002
EnsemblPlants:Zm00001d009640_T002	SEG:seg	:	:	:	:

Description

Malate dehydrogenase 2 mitochondrial

Coordinates

chr8:-:74045695..74049815

Molecular Weight (calculated)

38583.7 Da

IEP (calculated)

8.206

GRAVY (calculated)

0.122

Length

368 amino acids

Sequence
(BLAST)

001: MRPSLLKSTA ELLRRSRGYA SSANPERKVA ILGAAGGIGQ PLSLLMKLNP LVSSLSLYDI AGTPGVAADV SHINSPALVP PCSARSSGLA RTELDWIRAH
101: WFLLLQVKGF MGDDQLGEAL EGSDIVIIPA GVPRKPGMTR DDLFNINAGI VKALCTAIAK HCPNALVNMI SNPVNSTVPI AAEVFKKAGT YDEKKLFGVT
201: TLDVVRAKTF YAGKAGVPVT EVNVPVVGGH AGITILPLFS QATPASNSLS QEDIEALTKR TQDGGTEVVE AKAGKGSATL SMAYAGAVFA DACLKGLNGV
301: PDIVECSFVQ STVTELPFFA SKVRLGKNGV EEVLGLGELN DFEKKGLESL KVELKSSIDK GIKFAHGS

Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)

001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Arabidopsis Description

mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.