Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038112.1-P | Field mustard | mitochondrion | 27.96 | 18.91 |
| Bra030951.1-P | Field mustard | mitochondrion | 29.38 | 18.18 |
| CDY59402 | Canola | mitochondrion | 29.38 | 18.18 |
| CDY24107 | Canola | mitochondrion | 28.91 | 17.94 |
| CDY02518 | Canola | mitochondrion | 28.91 | 17.89 |
| CDY25868 | Canola | mitochondrion | 28.91 | 17.89 |
| AT1G53240.1 | Thale cress | mitochondrion | 28.91 | 17.89 |
| Bra039662.1-P | Field mustard | mitochondrion | 28.44 | 17.65 |
| CDY55845 | Canola | mitochondrion | 28.44 | 17.6 |
| CDY26002 | Canola | mitochondrion | 28.44 | 17.49 |
| TraesCS1B01G443200.1 | Wheat | extracellular, mitochondrion | 27.96 | 17.3 |
| TraesCS1D01G420500.1 | Wheat | mitochondrion | 27.96 | 17.3 |
| TraesCS1A01G412900.1 | Wheat | plastid | 27.49 | 17.01 |
| EES19985 | Sorghum | mitochondrion | 27.01 | 16.76 |
| VIT_10s0003g01000.t01 | Wine grape | mitochondrion | 27.96 | 16.76 |
| AT3G15020.1 | Thale cress | mitochondrion | 27.01 | 16.72 |
| GSMUA_AchrUn_... | Banana | mitochondrion, unclear | 27.49 | 16.67 |
| Zm00001d039089_P001 | Maize | mitochondrion | 26.54 | 16.47 |
| GSMUA_Achr4P08580_001 | Banana | mitochondrion | 27.01 | 16.43 |
| KRH26205 | Soybean | mitochondrion | 26.54 | 16.23 |
| KRH55117 | Soybean | mitochondrion | 26.54 | 16.23 |
| Os05t0574400-01 | Rice | extracellular | 26.07 | 16.18 |
| PGSC0003DMT400032266 | Potato | cytosol, extracellular | 26.07 | 15.9 |
| Solyc07g062650.2.1 | Tomato | extracellular | 26.07 | 15.9 |
| HORVU3Hr1G058460.1 | Barley | mitochondrion | 25.59 | 15.84 |
| Solyc12g014180.1.1 | Tomato | mitochondrion, unclear | 25.12 | 15.5 |
| PGSC0003DMT400039788 | Potato | mitochondrion | 24.64 | 15.25 |
| Zm00001d009640_P002 | Maize | mitochondrion, plasma membrane | 26.54 | 15.22 |
| VIT_19s0014g01640.t01 | Wine grape | mitochondrion | 24.17 | 14.7 |
| HORVU5Hr1G098890.10 | Barley | plastid | 23.22 | 13.57 |
| HORVU5Hr1G002010.1 | Barley | plastid | 23.22 | 11.98 |
| HORVU1Hr1G081550.1 | Barley | plastid | 20.85 | 11.03 |
| HORVU7Hr1G091760.2 | Barley | mitochondrion | 22.27 | 10.13 |
| HORVU1Hr1G090710.1 | Barley | cytosol | 0.47 | 0.25 |
| CDY55842 | Canola | mitochondrion | 0.0 | 0.0 |
| HORVU5Hr1G020370.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G090720.1 | EnsemblPlantsGene:HORVU1Hr1G090720 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Lactate/malate_DH_N | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR11540 |
| PANTHER:PTHR11540:SF45 | PFAM:PF00056 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000B46AA52 | UniProt:A0A287GPB7 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:546816610..546817243
Molecular Weight (calculated)
23298.0 Da
IEP (calculated)
10.681
GRAVY (calculated)
-0.430
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: NGGGKVFAIT CACEGDWQWL CPRCAGCHRA GRCEQVCVWC AGGYRQLQSC LGQRRVKQSK THHHTHTGTT KHLIASHWRR RQHFGSHPHL PLFSLNPPHH
101: RSGAHPHTRA HQRAVHSIEL RADEMRMSLL RSASQHLRRH RCDYSSSSSA TASPERKVAI LGAAGGIGQP LALLMKLNPL VSSLSLYDIA ATPGVAADVS
201: HINTRALVRP Y
101: RSGAHPHTRA HQRAVHSIEL RADEMRMSLL RSASQHLRRH RCDYSSSSSA TASPERKVAI LGAAGGIGQP LALLMKLNPL VSSLSLYDIA ATPGVAADVS
201: HINTRALVRP Y
001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q
Arabidopsis Description
mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.