Factsheet for HORVU5Hr1G098890.10

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G417600.1	Wheat	nucleus	98.34	99.44
TraesCS5B01G412500.1	Wheat	plastid	93.91	90.88
TraesCS5A01G407700.1	Wheat	cytosol, peroxisome, plastid	93.91	89.92
Os03t0773800-01	Rice	plastid	87.81	89.55
Zm00001d034241_P001	Maize	extracellular, plastid	87.81	88.55
HORVU5Hr1G002010.1	Barley	plastid	81.44	71.88
KXG37460	Sorghum	mitochondrion	87.53	71.49
HORVU3Hr1G058460.1	Barley	mitochondrion	59.83	63.34
HORVU1Hr1G081550.1	Barley	plastid	55.12	49.87
HORVU7Hr1G091760.2	Barley	mitochondrion	55.12	42.89
HORVU1Hr1G090710.1	Barley	cytosol	46.54	42.11
HORVU1Hr1G090720.1	Barley	peroxisome	13.57	23.22
HORVU5Hr1G020370.1	Barley	cytosol	0.0	0.0

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	Gene3D:3.40.50.720	Gene3D:3.90.110.10	MapMan:5.7.3.6.5	UniProt:A0A287SGM5	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0019752
GO:GO:0030060	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G098890	EnsemblPlants:HORVU5Hr1G098890.10	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF26
SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI000B469DD6	SEG:seg	:

Description

Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287SGM5]

Coordinates

chrchr5H:+:608994464..608997728

Molecular Weight (calculated)

37594.6 Da

IEP (calculated)

8.287

GRAVY (calculated)

0.134

Length

361 amino acids

Sequence
(BLAST)

001: MHPDATSPSH RIARVAAHLN PTRPQVSPME EGGAALRPAA CRAKGGAPGF KVAVVGAAGG IGQSLSLLMK MNPLVSVLHL YDVVNTPGVT ADVSHMDTSA
101: VVRGFIGQQQ LEAALTGMDL VIIPAGLPRK PGMTRDDLFN KNAGIVRSIC EGVAKSCPNA IVNLISNPVN STVPIAAEVF KRAGTYCPKR LLGVTTLDVA
201: RANTFVAEVL GVDPREVNVP VVGGHAGVTI LPLLSQVSPP CSFTPDEISY LTNRIQNGGT EVVEAKAGAG SATLSMAFAA AKFADACLRG MRGDAGIVEC
301: SYVASEVTEL SFFASKVRLG RGGAEEILPL GPLNDFERAG LEKAKKELSE SIQKGVSFMN K

Best Arabidopsis Sequence Match ( AT5G09660.1 )
(BLAST)

001: MEFRGDANQR IARISAHLTP QMEAKNSVIG RENCRAKGGN PGFKVAILGA AGGIGQSLSL LMKMNPLVSL LHLYDVVNAP GVTADVSHMD TGAVVRGFLG
101: AKQLEDALTG MDLVIIPAGI PRKPGMTRDD LFKINAGIVK TLCEGVAKCC PNAIVNLISN PVNSTVPIAA EVFKKAGTYD PKKLLGVTTL DVARANTFVA
201: EVLGLDPREV DVPVVGGHAG VTILPLLSQV KPPSSFTPQE IEYLTNRIQN GGTEVVEAKA GAGSATLSMA YAAAKFADAC LRGLRGDANV VECSFVASQV
301: TELAFFATKV RLGRTGAEEV YQLGPLNEYE RIGLEKAKDE LAGSIQKGVE FIRK

Arabidopsis Description

PMDH2Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B3H560]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.