Factsheet for Os03t0773800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G417600.1	Wheat	nucleus	89.55	88.8
HORVU5Hr1G098890.10	Barley	plastid	89.55	87.81
Zm00001d034241_P001	Maize	extracellular, plastid	88.14	87.15
Os12t0632700-01	Rice	extracellular, nucleus, plastid	82.2	81.74
TraesCS5B01G412500.1	Wheat	plastid	85.88	81.5
TraesCS5A01G407700.1	Wheat	cytosol, peroxisome, plastid	85.88	80.64
KXG37460	Sorghum	mitochondrion	88.14	70.59
Os01t0649100-01	Rice	mitochondrion	61.86	64.41
Os05t0574400-01	Rice	extracellular	61.02	63.53
Os08t0434300-01	Rice	plastid	55.93	55.62
Os07t0630800-03	Rice	plastid	58.47	51.24
Os01t0829800-01	Rice	plastid	55.37	49.49

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	Gene3D:3.40.50.720	Gene3D:3.90.110.10	EntrezGene:4334274	MapMan:5.7.3.6.5	ProteinID:AAP68889.1
ProteinID:ABF99109.1	EMBL:AK064972	EMBL:AK067105	EMBL:AK104821	ProteinID:BAF13333.1	ProteinID:BAS86617.1
ProteinID:EAZ28741.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099
GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615
GO:GO:0016616	GO:GO:0019752	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os03g0773800	EnsemblPlants:Os03t0773800-01	PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068
PANTHER:PTHR11540	PANTHER:PTHR11540:SF26	UniProt:Q7XZW5	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772
UniParc:UPI00001A9767	RefSeq:XP_015630602.1	:	:	:	:

Description

Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH). (Os03t0773800-01);Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH). (Os03t0773800-02);Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH). (Os03t0773800-03)

Coordinates

chr3:-:32086056..32089677

Molecular Weight (calculated)

37025.2 Da

IEP (calculated)

8.061

GRAVY (calculated)

0.150

Length

354 amino acids

Sequence
(BLAST)

001: MQPDSASHRI ARVAAHLSPS PRPQMEEGVR PAPCRAKGGA PGFKVAVLGA AGGIGQPLSL LMKLNPLVSV LHLYDVVNTP GVTADVSHMD TTAVVRGFLG
101: PNQLEAALTG MDLVIIPAGL PRKPGMTRDD LFNKNAGIVR SLCEGVAKCC PNAIVNLISN PVNSTVPIAA EVFKKAGTYD PKRLLGVTTL DVARANTFVA
201: EVLGIDPKDV NVPVVGGHAG VTILPLLSQV HPPCSFTPDE ISYLTKRIQN GGTEVVEAKA GAGSATLSMA FAAAKFGDAC LRAMRGDAGV VECSYVASAV
301: TELPFFATKV RLGRAGAEEV LPLGPLNDFE RAGLEMAKKE LMESIQKGID FMNK

Best Arabidopsis Sequence Match ( AT5G09660.1 )
(BLAST)

001: MEFRGDANQR IARISAHLTP QMEAKNSVIG RENCRAKGGN PGFKVAILGA AGGIGQSLSL LMKMNPLVSL LHLYDVVNAP GVTADVSHMD TGAVVRGFLG
101: AKQLEDALTG MDLVIIPAGI PRKPGMTRDD LFKINAGIVK TLCEGVAKCC PNAIVNLISN PVNSTVPIAA EVFKKAGTYD PKKLLGVTTL DVARANTFVA
201: EVLGLDPREV DVPVVGGHAG VTILPLLSQV KPPSSFTPQE IEYLTNRIQN GGTEVVEAKA GAGSATLSMA YAAAKFADAC LRGLRGDANV VECSFVASQV
301: TELAFFATKV RLGRTGAEEV YQLGPLNEYE RIGLEKAKDE LAGSIQKGVE FIRK

Arabidopsis Description

PMDH2Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B3H560]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.