Factsheet for Os07t0630800-03

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90313	Sorghum	plastid	75.25	78.35
Zm00001d022229_P001	Maize	plastid	71.29	75.0
Os08t0434300-01	Rice	plastid	60.89	69.1
Os01t0829800-01	Rice	plastid	63.12	64.39
Os01t0649100-01	Rice	mitochondrion	51.49	61.18
Os12t0632700-01	Rice	extracellular, nucleus, plastid	52.97	60.11
Os05t0574400-01	Rice	extracellular	50.0	59.41
Os03t0773800-01	Rice	plastid	51.24	58.47

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:23.1.3.4.3	Gene3D:3.40.50.720	Gene3D:3.90.110.10	EntrezGene:4343993	EMBL:AK059570
EMBL:AK106083	ProteinID:BAC20686.1	ProteinID:BAF22271.1	ProteinID:BAT02767.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0030060
GO:GO:0055114	InterPro:IPR015955	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS
InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os07g0630800	EnsemblPlants:Os07t0630800-03	PFAM:PF00056	PFAM:PF02866
ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF25	UniProt:Q8H4E0	SUPFAM:SSF51735	SUPFAM:SSF56327
TIGRFAMs:TIGR01772	UniParc:UPI000005E6C4	RefSeq:XP_015645072.1	SEG:seg	:	:

Description

Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-01);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-02);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-03);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-04)

Coordinates

chr7:-:26154069..26155901

Molecular Weight (calculated)

42224.1 Da

IEP (calculated)

9.029

GRAVY (calculated)

0.113

Length

404 amino acids

Sequence
(BLAST)

001: MASAAMSTLN LSSSPLTKQQ LRFGASTLSA EHVSGFSSAR PAPSLCCSSS HWRAVKLRPR RRPWRRAGNR VVAQAGGYKV AILGAAGGIG QPLSLLVKMS
101: PLVSALHLYD IANVDGVTAD LGHCNTPAKV AGFTGKEELA GCLAGVDVVV IPAGVPRKPG MTRDDLFGIN AGIVRELVEA VADHAPAALV HVISNPVNST
201: VPIAAEVLKR KGVYDPRKLF GVTTLDVVRA NTFVAEMKGL PLADVDVPVV GGHAAATILP LLSKARPKTA FTDEEVEALT RRIQNAGTEV VEAKAKAGGG
301: SATLSMAYAA ARFLEASLRG LDGDADVYEC SYVQCQAVPE LPFFACRVKL GRDGVEEVAA AGAELRGLTE FEARALEALK PQLKKSIDKG VAYAQQQPAT
401: VAMG

Best Arabidopsis Sequence Match ( AT3G47520.1 )
(BLAST)

001: MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL
101: LIKMSPLVST LHLYDIANVK GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK TLVEAVAENC PNAFIHIISN
201: PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301: GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA
401: AAN

Arabidopsis Description

MDHMalate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.