Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 9
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
17189339
mitochondrion: 19010998 extracellular: 19038476 mitochondrion: 23027867 extracellular: 23159799 extracellular: 24083427 extracellular: 25047395 plasma membrane: 27800704 plastid: 27992503 plasma membrane: 28056797 extracellular: 28232208 |
msms PMID:
23027867
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
23159799
doi
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID:
19010998
doi
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
24083427
doi
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID:
17189339
doi
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID:
19038476
doi
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os01t0649100-01 | Rice | mitochondrion | 92.06 | 92.06 |
EES19985 | Sorghum | mitochondrion | 91.47 | 91.47 |
Zm00001d039089_P001 | Maize | mitochondrion | 91.18 | 91.18 |
TraesCS1D01G420500.1 | Wheat | mitochondrion | 90.29 | 90.03 |
TraesCS1A01G412900.1 | Wheat | plastid | 90.0 | 89.74 |
TraesCS1B01G443200.1 | Wheat | extracellular, mitochondrion | 89.41 | 89.15 |
GSMUA_AchrUn_... | Banana | mitochondrion, unclear | 85.88 | 83.91 |
Zm00001d009640_P002 | Maize | mitochondrion, plasma membrane | 90.0 | 83.15 |
PGSC0003DMT400039788 | Potato | mitochondrion | 83.24 | 82.99 |
KRH55117 | Soybean | mitochondrion | 84.12 | 82.9 |
Solyc12g014180.1.1 | Tomato | mitochondrion, unclear | 83.24 | 82.75 |
GSMUA_Achr4P08580_001 | Banana | mitochondrion | 84.41 | 82.71 |
Solyc07g062650.2.1 | Tomato | extracellular | 84.12 | 82.66 |
PGSC0003DMT400032266 | Potato | cytosol, extracellular | 83.82 | 82.37 |
KRH26205 | Soybean | mitochondrion | 83.53 | 82.32 |
VIT_10s0003g01000.t01 | Wine grape | mitochondrion | 85.0 | 82.1 |
Bra038112.1-P | Field mustard | mitochondrion | 75.29 | 82.05 |
Bra030951.1-P | Field mustard | mitochondrion | 81.47 | 81.23 |
CDY59402 | Canola | mitochondrion | 81.18 | 80.94 |
CDY25868 | Canola | mitochondrion | 80.88 | 80.65 |
CDY02518 | Canola | mitochondrion | 80.88 | 80.65 |
VIT_19s0014g01640.t01 | Wine grape | mitochondrion | 82.06 | 80.4 |
AT1G53240.1 | Thale cress | mitochondrion | 80.59 | 80.35 |
CDY55845 | Canola | mitochondrion | 80.59 | 80.35 |
CDY24107 | Canola | mitochondrion | 79.71 | 79.71 |
CDY26002 | Canola | mitochondrion | 80.29 | 79.59 |
AT3G15020.1 | Thale cress | mitochondrion | 79.41 | 79.18 |
Bra039662.1-P | Field mustard | mitochondrion | 79.12 | 79.12 |
CDY55842 | Canola | mitochondrion | 30.0 | 75.56 |
Os12t0632700-01 | Rice | extracellular, nucleus, plastid | 65.29 | 62.36 |
Os03t0773800-01 | Rice | plastid | 63.53 | 61.02 |
HORVU1Hr1G090710.1 | Barley | cytosol | 70.0 | 59.65 |
Os08t0434300-01 | Rice | plastid | 59.71 | 57.02 |
Os01t0829800-01 | Rice | plastid | 59.71 | 51.26 |
Os07t0630800-03 | Rice | plastid | 59.41 | 50.0 |
HORVU1Hr1G090720.1 | Barley | peroxisome | 16.18 | 26.07 |
Protein Annotations
KEGG:00020+1.1.1.37 | KEGG:00270+1.1.1.37 | KEGG:00620+1.1.1.37 | KEGG:00630+1.1.1.37 | KEGG:00680+1.1.1.37 | KEGG:00710+1.1.1.37 |
KEGG:00720+1.1.1.37 | MapMan:2.3.8 | Gene3D:3.40.50.720 | Gene3D:3.90.110.10 | EntrezGene:4339682 | ProteinID:AAT69584.1 |
ProteinID:AAU44114.1 | ProteinID:BAF18303.1 | ProteinID:BAS95460.1 | ProteinID:EEE64778.1 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006108 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016615 | GO:GO:0016616 | GO:GO:0019752 | GO:GO:0030060 |
GO:GO:0055114 | InterPro:IPR015955 | EMBL:JX972152 | InterPro:L-lactate/malate_DH | InterPro:Lactate/malate_DH_C | InterPro:Lactate/malate_DH_N |
InterPro:Lactate_DH/Glyco_Ohase_4_C | InterPro:Malate_DH_AS | InterPro:Malate_DH_type1 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os05g0574400 | EnsemblPlants:Os05t0574400-01 |
PFAM:PF00056 | PFAM:PF02866 | PIRSF:PIRSF000102 | ScanProsite:PS00068 | PANTHER:PTHR11540 | PANTHER:PTHR11540:SF45 |
UniProt:Q6F361 | SUPFAM:SSF51735 | SUPFAM:SSF56327 | TIGRFAMs:TIGR01772 | UniParc:UPI00003BF567 | RefSeq:XP_015639465.1 |
SEG:seg | : | : | : | : | : |
Description
Similar to Malate dehydrogenase. (Os05t0574400-01)
Coordinates
chr5:-:28617700..28621468
Molecular Weight (calculated)
35437.9 Da
IEP (calculated)
8.299
GRAVY (calculated)
0.135
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSLLRYAA QALRRRDYSS AAAAAERKVA ILGAAGGIGQ PLALLMKLNP LVSSLSLYDI AGTPGVAADV SHINSPALVK GFVGEEQLGE ALEGSDVVII
101: PAGVPRKPGM TRDDLFNINA GIVKGLCTAI SKYCPNALVN MISNPVNSTV PIAAEVFKKA GTYDEKKLFG VTTLDVVRAK TFYAGKANVP VTEVNVPVVG
201: GHAGITILPL FSQATPASNA LSHEDIKALT KRTQDGGTEV VEAKAGKGSA TLSMAYAGAV FADACLKGLN GVPDVVECSF VQSTVTELPF FASKVRLGKN
301: GVEEVLGLGQ LSEFEKEGLE NLKGELKSSI EKGIKFAHAN
101: PAGVPRKPGM TRDDLFNINA GIVKGLCTAI SKYCPNALVN MISNPVNSTV PIAAEVFKKA GTYDEKKLFG VTTLDVVRAK TFYAGKANVP VTEVNVPVVG
201: GHAGITILPL FSQATPASNA LSHEDIKALT KRTQDGGTEV VEAKAGKGSA TLSMAYAGAV FADACLKGLN GVPDVVECSF VQSTVTELPF FASKVRLGKN
301: GVEEVLGLGQ LSEFEKEGLE NLKGELKSSI EKGIKFAHAN
001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q
Arabidopsis Description
mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.