Factsheet for HORVU1Hr1G090710.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G420500.1	Wheat	mitochondrion	65.16	76.25
TraesCS1B01G443200.1	Wheat	extracellular, mitochondrion	64.91	75.95
TraesCS1A01G412900.1	Wheat	plastid	64.91	75.95
CDY55842	Canola	mitochondrion	25.06	74.07
Zm00001d039089_P001	Maize	mitochondrion	59.65	70.0
Os05t0574400-01	Rice	extracellular	59.65	70.0
EES19985	Sorghum	mitochondrion	59.4	69.71
HORVU3Hr1G058460.1	Barley	mitochondrion	57.64	67.45
Zm00001d009640_P002	Maize	mitochondrion, plasma membrane	59.9	64.95
VIT_10s0003g01000.t01	Wine grape	mitochondrion	56.89	64.49
CDY25868	Canola	mitochondrion	54.89	64.22
CDY59402	Canola	mitochondrion	54.89	64.22
CDY02518	Canola	mitochondrion	54.89	64.22
Bra030951.1-P	Field mustard	mitochondrion	54.89	64.22
AT1G53240.1	Thale cress	mitochondrion	54.89	64.22
PGSC0003DMT400032266	Potato	cytosol, extracellular	55.64	64.16
Solyc07g062650.2.1	Tomato	extracellular	55.64	64.16
KRH26205	Soybean	mitochondrion	55.39	64.06
KRH55117	Soybean	mitochondrion	55.39	64.06
CDY55845	Canola	mitochondrion	54.64	63.93
CDY26002	Canola	mitochondrion	54.89	63.85
CDY24107	Canola	mitochondrion	54.39	63.82
Solyc12g014180.1.1	Tomato	mitochondrion, unclear	54.64	63.74
GSMUA_Achr4P08580_001	Banana	mitochondrion	55.39	63.69
Bra039662.1-P	Field mustard	mitochondrion	54.14	63.53
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	55.39	63.51
PGSC0003DMT400039788	Potato	mitochondrion	54.14	63.34
AT3G15020.1	Thale cress	mitochondrion	53.88	63.05
VIT_19s0014g01640.t01	Wine grape	mitochondrion	54.64	62.82
Bra038112.1-P	Field mustard	mitochondrion	49.12	62.82
HORVU5Hr1G098890.10	Barley	plastid	42.11	46.54
HORVU5Hr1G002010.1	Barley	plastid	44.61	43.52
HORVU1Hr1G081550.1	Barley	plastid	39.35	39.35
HORVU7Hr1G091760.2	Barley	mitochondrion	39.85	34.27
HORVU1Hr1G090720.1	Barley	peroxisome	0.25	0.47
HORVU5Hr1G020370.1	Barley	cytosol	0.0	0.0

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	Gene3D:3.40.50.720	Gene3D:3.90.110.10	MapMan:35.1	UniProt:A0A287GPD9	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099	GO:GO:0006108
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616
GO:GO:0030060	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G090710	EnsemblPlants:HORVU1Hr1G090710.1	InterPro:IPR015955	InterPro:Lactate/malate_DH_C
InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056
PFAM:PF02866	ScanProsite:PS00068	PANTHER:PTHR11540	PANTHER:PTHR11540:SF45	SUPFAM:SSF51735	SUPFAM:SSF56327
TIGRFAMs:TIGR01772	UniParc:UPI000B486EEE	SEG:seg	:	:	:

Description

Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287GPD9]

Coordinates

chrchr1H:-:546756850..546765118

Molecular Weight (calculated)

27398.2 Da

IEP (calculated)

5.793

GRAVY (calculated)

0.119

Length

399 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLQVKG FVGDDQLGEA LEGADLVIIP AGVPRKPGMT RDDLFKINAG IVKGLCTAIA RHCPNALVNM
201: ISNPVNSTVP IAAEVFKKAG TYDEKKLFGV TTLDVVRAKT FYAGKANVPV TGVNVPVVGG HAGITILPLF SQATPASNAL SHEDLVALTK RTQDGGTEVV
301: EAKAGKGSAT LSMAYAGAVF GDACLKGLNG VPDIIECSFV QSTVTELPFF ASKVRLGKSG VEEVLGLGEL SALEKEGLES LKGELLSSIE KGVKFAQES

Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)

001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Arabidopsis Description

mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.