Factsheet for Bra030951.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25868	Canola	mitochondrion	97.95	97.95
Bra038112.1-P	Field mustard	mitochondrion	89.44	97.76
CDY55845	Canola	mitochondrion	97.65	97.65
AT1G53240.1	Thale cress	mitochondrion	96.48	96.48
Bra039662.1-P	Field mustard	mitochondrion	96.19	96.47
KRH55117	Soybean	mitochondrion	85.34	84.35
KRH26205	Soybean	mitochondrion	85.04	84.06
Os01t0649100-01	Rice	mitochondrion	82.4	82.65
Solyc12g014180.1.1	Tomato	mitochondrion, unclear	82.7	82.46
Zm00001d044042_P001	Maize	extracellular, mitochondrion, plastid	81.52	81.76
PGSC0003DMT400039788	Potato	mitochondrion	81.52	81.52
HORVU3Hr1G058460.1	Barley	mitochondrion	81.52	81.52
Os05t0574400-01	Rice	extracellular	81.23	81.47
EES19985	Sorghum	mitochondrion	80.94	81.18
TraesCS1D01G420500.1	Wheat	mitochondrion	80.94	80.94
TraesCS1B01G443200.1	Wheat	extracellular, mitochondrion	80.94	80.94
TraesCS1A01G412900.1	Wheat	plastid	80.94	80.94
GSMUA_AchrUn_...	Banana	mitochondrion, unclear	82.4	80.75
PGSC0003DMT400032266	Potato	cytosol, extracellular	81.82	80.64
TraesCS3D01G236200.1	Wheat	mitochondrion	80.35	80.59
Zm00001d039089_P001	Maize	mitochondrion	80.06	80.29
TraesCS3B01G265000.1	Wheat	golgi, mitochondrion, unclear	80.06	80.29
VIT_19s0014g01640.t01	Wine grape	mitochondrion	81.52	80.12
Solyc07g062650.2.1	Tomato	extracellular	81.23	80.06
GSMUA_Achr4P08580_001	Banana	mitochondrion	80.94	79.54
TraesCS3A01G234800.2	Wheat	mitochondrion	78.89	79.12
Zm00001d009640_P002	Maize	mitochondrion, plasma membrane	80.35	74.46
Bra030204.1-P	Field mustard	cytosol	62.17	60.06
Bra009397.1-P	Field mustard	cytosol	61.88	58.94
Bra028624.1-P	Field mustard	cytosol	61.29	58.38
KXG33002	Sorghum	cytosol, nucleus, peroxisome	81.23	57.47
HORVU1Hr1G090710.1	Barley	cytosol	64.22	54.89
Bra019504.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.63	52.83
Bra018137.1-P	Field mustard	plastid	59.53	50.5
HORVU1Hr1G090720.1	Barley	peroxisome	18.18	29.38
Bra019790.1-P	Field mustard	plastid	32.55	28.39

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37	KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37	MapMan:2.3.8	Gene3D:3.40.50.720	Gene3D:3.90.110.10	EnsemblPlantsGene:Bra030951	EnsemblPlants:Bra030951.1
EnsemblPlants:Bra030951.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006091	GO:GO:0006099
GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615
GO:GO:0016616	GO:GO:0019752	GO:GO:0030060	GO:GO:0055114	InterPro:IPR015955	InterPro:L-lactate/malate_DH
InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	UniProt:M4EQ80	InterPro:Malate_DH_AS	InterPro:Malate_DH_type1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056	PFAM:PF02866	PIRSF:PIRSF000102	ScanProsite:PS00068	PANTHER:PTHR11540
PANTHER:PTHR11540:SF44	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01772	UniParc:UPI0002545807	SEG:seg

Description

AT1G53240 (E=2e-177) | malate dehydrogenase (NAD), mitochondrial

Coordinates

chrA08:+:1017883..1019495

Molecular Weight (calculated)

35692.3 Da

IEP (calculated)

8.842

GRAVY (calculated)

0.149

Length

341 amino acids

Sequence
(BLAST)

001: MFRSALVRSS ASAKQSLLRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS QVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC SAIAKYCPHA LVNMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RAKTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSGDVLTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVVEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GQLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Best Arabidopsis Sequence Match ( AT1G53240.1 )
(BLAST)

001: MFRSMLVRSS ASAKQAVIRR SFSSGSVPER KVAILGAAGG IGQPLALLMK LNPLVSSLSL YDIANTPGVA ADVGHINTRS EVVGYMGDDN LAKALEGADL
101: VIIPAGVPRK PGMTRDDLFN INAGIVKNLC TAIAKYCPHA LINMISNPVN STVPIAAEIF KKAGMYDEKK LFGVTTLDVV RARTFYAGKA NVPVAEVNVP
201: VIGGHAGVTI LPLFSQATPQ ANLSSDILTA LTKRTQDGGT EVVEAKAGKG SATLSMAYAG ALFADACLKG LNGVPDVIEC SYVQSTITEL PFFASKVRLG
301: KNGVEEVLDL GPLSDFEKEG LEALKPELKS SIEKGVKFAN Q

Arabidopsis Description

mMDH1Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.